Structure of PDB 6zk5 Chain A

Receptor sequence
>6zk5A (length=316) Species: 4577 (Zea mays) [Search protein sequence]
NSKIIIDTDPGIDDSVAILMAFQMPGVQVLGLTTIFGNCTTEHATRNALI
LCEKASHLEVPVAEGSHEPLKGGKPHVADFVHGPDGLGNVDLPDPTIKKV
EESATDFLVDKVSRFPGEVSVLALGPLTNIALAIKKDPSFVKNVKKIVVL
GGAFFAAGNATPSAEANIHSDPEAADMVFTSGADIYVVGLNITTQVSFTD
KDLLELRNSQGKYAQFLCDVCKFYLDWHTESYGAPVIFLHDPVSFAALVR
PELFTFKKGVVRVETQGICVGHTSMDMLLKKWNSENPWTGYSPISVAWTV
DVPKVVAFVKELVTKP
3D structure
PDB6zk5 Plant nucleoside N-ribohydrolases: substrate binding and role in nitrogen storage mobilization
ChainA
Resolution1.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.2.-
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 CA A D8 D13 L123 D240 D9 D14 L124 D241
BS02 IMH A D12 N37 H81 L149 N158 E164 A165 W226 H239 D240 D13 N38 H82 L150 N159 E165 A166 W227 H240 D241
Gene Ontology
Molecular Function
GO:0016798 hydrolase activity, acting on glycosyl bonds
GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds
GO:0046872 metal ion binding
Biological Process
GO:0006139 nucleobase-containing compound metabolic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:6zk5, PDBe:6zk5, PDBj:6zk5
PDBsum6zk5
PubMed38044809
UniProtB6T563

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