Structure of PDB 6za3 Chain A

Receptor sequence
>6za3A (length=238) Species: 176299 (Agrobacterium fabrum str. C58) [Search protein sequence]
ATHGGRAVIELREKILSGELPGGMRLFEVSTAELLDISRTPVREALSRLT
EEGLLNRLPGGGFVVRRFGFADVVDAIEVRGVMEGTAARLAAERGVSKVA
LEEIDATVQQLDLCFGDRVDDVDFDGYAALNRIFHHQLAALCGSEMIRRE
VERASSLPFASPSAFLPDKANIGAFRRSLRGAQEQHKAIVAAIVAREGAR
AEAVAREHSRTARTNLEYMIREAPELIAQVPGLALISD
3D structure
PDB6za3 Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum.
ChainA
Resolution2.05 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A R31 F33 E34 R45 R25 F27 E28 R39
BS02 dna A T8 H9 S44 T46 P47 T2 H3 S38 T40 P41
BS03 ZN A N137 H141 H192 H214 N131 H135 H186 H208
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003700 DNA-binding transcription factor activity
GO:0046872 metal ion binding
Biological Process
GO:0006355 regulation of DNA-templated transcription

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:6za3, PDBe:6za3, PDBj:6za3
PDBsum6za3
PubMed33313837
UniProtA9CJ36

[Back to BioLiP]