Structure of PDB 6z2p Chain A

Receptor sequence
>6z2pA (length=356) Species: 349741 (Akkermansia muciniphila ATCC BAA-835) [Search protein sequence]
VTVPDALKDRIALKKTARQLNIVYFLGSDTEPVPDYERRLSELLLYLQQF
YGKEMQRHGYGARSFGLDIKSPGRVNIIEYKAKNPAAHYPYENGGGWKAA
QELDEFFKAHPDRKKSQHTLIIMPTWNDEKNGPDNPGGVPFYGMGRNCFA
LDYPAFDIKHLGQKTREGRLLTKWYGGMAAALGHGLNLPHNHQTASDGKK
YGTALMGSGNYTFGTSPTFLTPASCALLDACEVFSVTPSQQFYEGKPEVE
VGDVAISFKGDQILVSGNYKSPQTVKALNVYIQDPPYAVNQDYDAVSFSR
RLGKKSGKFSMKIDKKELEGLNNNEFRISLMFILANGLHMQKHFTFHWDA
LQDYRD
3D structure
PDB6z2p Structural basis of mammalian mucin processing by the human gut O-glycopeptidase OgpA from Akkermansia muciniphila.
ChainA
Resolution2.16 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A Y167 G168 H209 L213 H215 Y236 N315 Y318 Y142 G143 H184 L188 H190 Y211 N290 Y293
BS02 GAL A Y116 G162 V164 F166 W199 Y91 G137 V139 F141 W174
BS03 CA A Q308 D309 P311 Q316 D319 Q283 D284 P286 Q291 D294
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:6z2p, PDBe:6z2p, PDBj:6z2p
PDBsum6z2p
PubMed32973204
UniProtB2UR60

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