Structure of PDB 6yo9 Chain A

Receptor sequence
>6yo9A (length=398) Species: 2746 (Halomonas elongata) [Search protein sequence]
IQVSLPFTREEYAGRLWKVRTEMASRGIDVLVISDPSNMAWLTGYDGWSF
YVHQCVLLGLEGEPVWYGRRMDANGALRTCWMDPDNITYYPDHYVQNPDM
HPMDYLAQTILPDRGWHEGVVGMEMDNYYFSAKAYQCLLRELPHARFADA
NSLVNWCRAIKSPQEIEYMRVAGKIVAGMHSRILEVIEPGLPKSKLVSEI
YRVGIEGWTSPEGKVFGGDYPAIVPMLPTGKDAAAPHLTWDDSPFREGEG
TFFEIAGVYKRYHAPMSRTVYLGRPPSEFVRAESALLEGIENGLEVAKPG
NRTADIAMALGAAMDKYGFDRGGARCGYPIGISYPPDWGERTMSLRPSDE
TILEPGMTFHFMPGLWVEDWGLEITESILITESGCETLADFPRQLFVK
3D structure
PDB6yo9 Degradation of the microbial stress protectants and chemical chaperones ectoine and hydroxyectoine by a bacterial hydrolase-deacetylase complex.
ChainA
Resolution2.4 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.5.4.44: ectoine hydrolase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 P4B A E255 Y329 M363 E254 Y328 M362
BS02 P4B A Y52 R70 Y51 R69
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Biological Process
GO:0042400 ectoine catabolic process
Cellular Component
GO:0005737 cytoplasm

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:6yo9, PDBe:6yo9, PDBj:6yo9
PDBsum6yo9
PubMed32404365
UniProtE1V7W1|DOEA_HALED Ectoine hydrolase (Gene Name=doeA)

[Back to BioLiP]