Structure of PDB 6yde Chain A

Receptor sequence
>6ydeA (length=224) Species: 1934374 (Achaetomiella virescens) [Search protein sequence]
HTRMFSVWVNGVDQGDGQNVYIRTPPNTDPIKDLASPALACNVKGGEPVP
QFVSASAGDKLTFEWYRVKRGDDIIDPSHSGPITTWIAAFTSPTMDGTGP
VWSKIHEEGYDASTKSWAVDKLIANKGMWDFTLPSQLKPGKYMLRQEIVA
HHESDATFDKNPKRGAQFYPSCVQVDVKGVGGDAVPDQAFDFNKGYKYSD
PGIAFDMYTDFDSYPIPGPPVWDA
3D structure
PDB6yde Oligosaccharide Binding and Thermostability of Two Related AA9 Lytic Polysaccharide Monooxygenases.
ChainA
Resolution2.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.1.4: cellulase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 BGC A R3 N27 T28 R3 N27 T28
BS02 BGC A H1 T28 R67 H1 T28 R67
BS03 BGC A D76 S78 H152 D76 S78 H152
BS04 BGC A E153 R164 E153 R164
BS05 BGC A D155 Y208 D155 Y208
BS06 CU A H1 H79 H1 H79
Gene Ontology
Molecular Function
GO:0004497 monooxygenase activity
GO:0046872 metal ion binding
Biological Process
GO:0030245 cellulose catabolic process
Cellular Component
GO:0005576 extracellular region

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6yde, PDBe:6yde, PDBj:6yde
PDBsum6yde
PubMed32818374
UniProtA0A223GEC9|LP9A_COLVR AA9 family lytic polysaccharide monooxygenase A (Gene Name=AA9A)

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