Structure of PDB 6xng Chain A

Receptor sequence
>6xngA (length=294) Species: 10090 (Mus musculus) [Search protein sequence]
KNYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQ
GKLSNQQWEKLQHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSAGCE
MYPGNASESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQG
TSATVQMLLNDTCPLFVRGLLEAGKSDLEKQEKPVAWLSSVPSSAHGHRQ
LVCHVSGFYPKPVWVMWMRGDQEQQGTHRGDFLPNADETWYLQATLDVEA
GEEAGLACRVKHSSLGGQDIILYWGSLHHILDAQKMVWNHRHHH
3D structure
PDB6xng Host immunomodulatory lipids created by symbionts from dietary amino acids.
ChainA
Resolution2.79 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 V8P A F10 L163 F171 F5 L158 F166
BS02 V8P A Q14 S28 Y73 S76 F77 D80 L100 W133 L150 D153 G155 T156 T159 V160 Q9 S23 Y68 S71 F72 D75 L95 W128 L145 D148 G150 T151 T154 V155
External links
PDB RCSB:6xng, PDBe:6xng, PDBj:6xng
PDBsum6xng
PubMed34759313
UniProtP11609|CD1D1_MOUSE Antigen-presenting glycoprotein CD1d1 (Gene Name=Cd1d1)

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