Structure of PDB 6xm6 Chain A

Receptor sequence
>6xm6A (length=484) Species: 627192 (Sphingobium sp. SYK-6) [Search protein sequence]
AHFPDTPAFTGFNAPSRIECDIPNLVHEGTIPPELNGAFFRVQPDPQFPP
RLGDDISFNGDGMITRFHIHDGQCDIKQRWAKTNKWKLENAAGKALFGSY
RNPLTDDESVKGEYRSTANTNAFVFAGKLWAMKEDSPSLTMDPATMETFG
FEKFGGKMTGQTFTAHPKVDPLTGNMVAIGYAASGLCTDDVCLYEISPDG
ELIYEAWFKVPYYCMMHDFGVTKDYLVLHIVPSIGSWDRLEKGLPHFGFD
TTLPVYLGIIPRRADLKQEDIRWFKRENCFASHVMNAFQEGTKVHVDVPE
AENNMFPFFPDVHGAPFNPQQAMSRLTRWTVDMASNSDEFDSVTRLTETA
GEFPRIDDRMTGLPYRYGWMLEMDMKRPVELKGGFLMNCLFLKDHQTGAE
QHWWCGPTSSLQEPAFIPRSKDAPEGDGWIVQVCNRLADHKSDLLIFEAL
DIEKGPVATVHLPFALRFGLHGNWANAEEIGLAA
3D structure
PDB6xm6 Structural and functional analysis of lignostilbene dioxygenases from Sphingobium sp. SYK-6.
ChainA
Resolution1.45 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.13.11.-
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 CO A H167 H218 H284 H476 H166 H217 H283 H471
Gene Ontology
Molecular Function
GO:0010436 carotenoid dioxygenase activity
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0046872 metal ion binding
GO:0051213 dioxygenase activity
Biological Process
GO:0016121 carotene catabolic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:6xm6, PDBe:6xm6, PDBj:6xm6
PDBsum6xm6
PubMed33965373
UniProtG2IQT9

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