Structure of PDB 6x00 Chain A

Receptor sequence
>6x00A (length=274) Species: 10090 (Mus musculus) [Search protein sequence]
MGPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRA
PWMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMS
GCDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQ
SGAAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEV
TLRCWALGFYPADITLTWQLNGEELMELVETRPAGDGTFQKWASVVVPLG
KEQNYTCRVYHEGLPEPLTLRWEP
3D structure
PDB6x00 Overlapping Peptides Elicit Distinct CD8 + T Cell Responses following Influenza A Virus Infection.
ChainA
Resolution1.55 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A Y7 E9 E63 K66 Q70 W73 S77 N80 Y84 Q97 S99 T143 K146 W147 H155 Y156 Y159 E163 W167 Y171 Y8 E10 E64 K67 Q71 W74 S78 N81 Y85 Q98 S100 T144 K147 W148 H156 Y157 Y160 E164 W168 Y172
External links
PDB RCSB:6x00, PDBe:6x00, PDBj:6x00
PDBsum6x00
PubMed32868409
UniProtP01899|HA11_MOUSE H-2 class I histocompatibility antigen, D-B alpha chain (Gene Name=H2-D1)

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