Structure of PDB 6wj6 Chain A

Receptor sequence

>6wj6A (length=302) Species: 1111708 (Synechocystis sp. PCC 6803 substr. Kazusa) [Search protein sequence]

ASLWEQFCQWVTSTNNRIYVGWFGTLMIPTLLTATTCFIIAFIAAPPVDI
DGIREPVAGSLLYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGG
PYQLVVFHFLIGIFCYMGRQWELSYRLGMRPWICVAYSAPVSAATAVFLI
YPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSL
FSAMHGSLVTSSLVIVAAHGYFGRLIFQYASFNNSRSLHFFLGAWPVIGI
WFTAMGVSTMAFNLNGFNFNQSILDSQGRVIGTWADVLNRANIGFEVMHE
RN

3D structure

PDB

6wj6 Cryo-EM Structure of Monomeric Photosystem II from Synechocystis sp. PCC 6803 Lacking the Water-Oxidation Complex

Chain

Resolution

2.58 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Enzymatic activity

Enzyme Commision number

1.10.3.9: photosystem II.

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	peptide	A	R27 N76 I77	R17 N66 I67
BS02	FE2	A	H215 H272	H205 H239
BS03	CLA	A	F119 P150 A153 M183 F186 Q187 I192 H198 G201 V202 V205 F206 T286 V290	F109 P140 A143 M173 F176 Q177 I182 H188 G191 V192 V195 F196 T253 V257
BS04	CLA	A	M199 V202 A203	M189 V192 A193
BS05	PHO	A	L41 A44 T45 F48 F119 Y126 Q130 Y147 P150 G175 P279	L31 A34 T35 F38 F109 Y116 Q120 Y137 P140 G165 P246
BS06	CLA	A	L36 T40 F93 Y94 P95 I96 W97 L114 H118	L26 T30 F83 Y84 P85 I86 W87 L104 H108
BS07	CLA	A	F33 I121 F124 W131	F23 I111 F114 W121
BS08	CLA	A	T45 M172 I176 T179 F180 M183	T35 M162 I166 T169 F170 M173
BS09	PHO	A	L210 M214	L200 M204

Gene Ontology

	Molecular Function
GO:0005506	iron ion binding
GO:0009055	electron transfer activity
GO:0010242	oxygen evolving activity
GO:0016168	chlorophyll binding
GO:0016491	oxidoreductase activity
GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
GO:0046872	metal ion binding

	Biological Process
GO:0009635	response to herbicide
GO:0009772	photosynthetic electron transport in photosystem II
GO:0015979	photosynthesis
GO:0019684	photosynthesis, light reaction

	Cellular Component
GO:0009523	photosystem II
GO:0009579	thylakoid
GO:0016020	membrane
GO:0030096	plasma membrane-derived thylakoid photosystem II
GO:0031676	plasma membrane-derived thylakoid membrane
GO:0042651	thylakoid membrane

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component

External links

PDB	RCSB:6wj6, PDBe:6wj6, PDBj:6wj6
PDBsum	6wj6
PubMed
UniProt	P16033\|PSBA2_SYNY3 Photosystem II protein D1 2 (Gene Name=psbA2)

[Back to BioLiP]