Structure of PDB 6vx1 Chain A

Receptor sequence
>6vx1A (length=623) Species: 882 (Nitratidesulfovibrio vulgaris str. Hildenborough) [Search protein sequence]
KTIRSRSIWDDAHAMLEKAKAEGISTVWDRAAEQTPKFGELGTCCRNCIM
GPCRIANRKDGKMRLGVCGADADVIVARNFGRFIAGGAAGHSDHGRDLIE
TLEAVAEGKAPGYTIRDVAKLRRIAAELGVADAATRPAHDVAADLVTICY
NDFGSRRNALAFLARAPQVRRDLWQRLGMTPRGVDREIAEMMHRTHMGCD
NDHTSLLVHAARTALADGWGGSMIGTELSDILFGTPRPRQSTVNLGVLRK
DAVNILVHGHNPVVSEMILAATREPAVRQAAQDAGAADINVAGLCCTGNE
LLMRQGIPMAGNHLMTELAIVTGAADAIVADYQCIMPSLVQIAACYHTRF
VTTSPKGRFTGATHVEVHPHNAQERCREIVMLAIDAYTRRDPARVDIPSQ
PVSIMSGFSNEAILEALGGTPKPLIDAVVAGQIRGFVGIVGCNNPKIRQD
SANVTLTRELIRRDIMVLATGCVTTAAGKAGLLVPEAASKAGEGLAAVCR
SLGVPPVLHMGSCVDNSRILQLCALLATTLGVDISDLPVGASSPEWYSEK
AAAIAMYAVASGIPTHLGLPPNILGSENVTAMALHGLQDVVGAAFMVEPD
PVKAADMLEAHIVARRARLGLTS
3D structure
PDB6vx1 The Solvent-Exposed Fe-S D-Cluster Contributes to Oxygen-Resistance inDesulfovibrio vulgarisNi-Fe Carbon Monoxide Dehydrogenase.
ChainA
Resolution2.78 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.2.7.4: anaerobic carbon-monoxide dehydrogenase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 SF4 A C51 C54 G57 C59 V73 C74 R84 M203 C45 C48 G51 C53 V67 C68 R78 M197
BS02 CUV A H266 C301 C302 C340 G447 C448 G477 C478 C519 Y553 S554 K556 H260 C295 C296 C334 G441 C442 G471 C472 C513 Y547 S548 K550
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0004601 peroxidase activity
GO:0016151 nickel cation binding
GO:0016491 oxidoreductase activity
GO:0043885 anaerobic carbon-monoxide dehydrogenase activity
GO:0046872 metal ion binding
GO:0050418 hydroxylamine reductase activity
GO:0051537 2 iron, 2 sulfur cluster binding
GO:0051539 4 iron, 4 sulfur cluster binding
Biological Process
GO:0006091 generation of precursor metabolites and energy
GO:0042542 response to hydrogen peroxide
GO:0098869 cellular oxidant detoxification

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Molecular Function
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Biological Process
External links
PDB RCSB:6vx1, PDBe:6vx1, PDBj:6vx1
PDBsum6vx1
PubMed32655979
UniProtQ72A99

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