Structure of PDB 6vt9 Chain A

Receptor sequence
>6vt9A (length=335) Species: 5762 (Naegleria gruberi) [Search protein sequence]
RKLATIRTAGEITPIAGAEAIECCHVDGWTCVIKKGEFKQGDRGVYFEID
SFIKEDNDRYPMLSKQVIDYEGQRGTRLRTARLRGQLSQGLFLPMDRFPE
LASNQVGDDVTEILGITKWEPPISTNLSGEILGEFPTFISKTDQERVQNL
IPQIEENKGQKFEVTVKLDGSSMTVYRKDDHIGVCGRNWELRETATNAQW
HAARRNKMIEGLQFLNRNLALQGAIIGESIQGNLEKLKGQDFYLFDIYDI
DKAQYLTPIERQSLVKQLNDNGFTVKHVPILDDLELNHTAEQILAMADGP
SLNKNVKREGLVFKRLDGKFSFKAISNAYLEKHKD
3D structure
PDB6vt9 Caveat mutator: alanine substitutions for conserved amino acids in RNA ligase elicit unexpected rearrangements of the active site for lysine adenylylation.
ChainA
Resolution2.49 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ATP A K121 D146 Q147 R149 K170 L171 S175 R190 F248 V315 K326 K118 D143 Q144 R146 K167 L168 S172 R187 F245 V312 K323
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:6vt9, PDBe:6vt9, PDBj:6vt9
PDBsum6vt9
PubMed32315072
UniProtD2W2Z5

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