Structure of PDB 6ven Chain A

Receptor sequence
>6venA (length=106) Species: 8355 (Xenopus laevis) [Search protein sequence]
ARTKQTARPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK
TDLRFQSSAVKALQEASEAYLVALFEDTNLCAIHAKRVTIKPKDIQLARR
IRGERA
3D structure
PDB6ven Structural basis for COMPASS recognition of an H2B-ubiquitinated nucleosome.
ChainA
Resolution3.37 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A H39 R40 Y41 G44 V46 R49 K64 L65 R69 H10 R11 Y12 G15 V17 R20 K35 L36 R40
BS02 dna A R42 R72 R83 R116 V117 T118 R13 R43 R54 R87 V88 T89
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005694 chromosome

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Molecular Function
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Cellular Component
External links
PDB RCSB:6ven, PDBe:6ven, PDBj:6ven
PDBsum6ven
PubMed31922488
UniProtP84233|H32_XENLA Histone H3.2

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