Structure of PDB 6vdq Chain A

Receptor sequence
>6vdqA (length=305) Species: 1914 (Streptomyces lavendulae) [Search protein sequence]
VAQVATVPFRLGRPEELPGTLDELRAAVSARAGEAVRGLNRPGARTDLAA
LLAATERTRAALAPVGAGPVGDDPSESEANRDNDLAFGIVRTRGPVAELL
VDAALAALAGILEVAVDRGSDLEDAAWQRFIGGFDALLGWLADPHSAPRP
ATVPGAGPAGPPVHQDALRRWVRGHHVFMVLAQGCALATACLRDSAARGD
LPGAEASAAAAEALMRGCQGALLYAGDANREQYNEQIRPTLMPPVAPPKM
SGLHWRDHEVLIKELAGSRDAWEWLSAQGSERPATFRAALAETYDSHIGV
CGHFV
3D structure
PDB6vdq A novel catalytic heme cofactor in SfmD with a single thioether bond and a bis -His ligand set revealed by a de novo crystal structural and spectroscopic study.
ChainA
Resolution1.78 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.11.2.5: 3-methyl-L-tyrosine peroxygenase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 HEC A F194 C234 M266 W271 H274 I278 H313 C317 F320 F178 C218 M250 W255 H258 I262 H297 C301 F304
Gene Ontology
Molecular Function
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding
Biological Process
GO:0006355 regulation of DNA-templated transcription
GO:0017000 antibiotic biosynthetic process

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Molecular Function
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Biological Process
External links
PDB RCSB:6vdq, PDBe:6vdq, PDBj:6vdq
PDBsum6vdq
PubMed34163669
UniProtB0CN28|SFMD_STRLA 3-methyl-L-tyrosine peroxygenase (Gene Name=sfmD)

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