Structure of PDB 6vcf Chain A

Receptor sequence
>6vcfA (length=453) Species: 1078905 (Candidatus Nitrosotalea devanaterra) [Search protein sequence]
NKFQLGFSTLSEELDLESLQVKGTIPKWLSGTLIRNGPAKFEVGKEKFQH
WFDGLAMLHKFSFKEGKVSYANKFLESKAYQSARDTDKISYREFATDPCK
FTDNANVNVTKIAERFVAMTETPLPVEFDINTLKTVGVFAYDDKIESGLT
TAHPHYDFVKNELVNYATKISRSSNYNVYKIADKTNHRNLIGSIPVEEPA
YMHSFAMTENYVVLVEYPFVVKPLDLLLSGKPFIENFSWKPENGTRFIIV
NRQNGNLVGTYKSDAFFAFHHVNAFEKQEEIFVDIIAYQDSSIVNALYLD
ILRGQKTDTIPTSHIRRYRIPLSGGQVEYEMLSSEAVELPRINYKQYNTK
DYRFVYGISTYSASDFANQLVKIDILRKSSKIWSEKDCYPGEPVFVGAPD
ATKEDEGLILSAVLDATNAKSFLLILDATTFEEVARAEVPHHIPFGFHGN
YFE
3D structure
PDB6vcf Structural basis for carotenoid cleavage by an archaeal carotenoid dioxygenase.
ChainA
Resolution2.687 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FE2 A H172 H222 H289 H467 H153 H203 H270 H448
Gene Ontology
Molecular Function
GO:0003834 beta-carotene 15,15'-dioxygenase activity
GO:0010436 carotenoid dioxygenase activity
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0046872 metal ion binding
GO:0051213 dioxygenase activity
Biological Process
GO:0016121 carotene catabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:6vcf, PDBe:6vcf, PDBj:6vcf
PDBsum6vcf
PubMed32747548
UniProtA0A128A3G4

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