Structure of PDB 6vaa Chain A

Receptor sequence
>6vaaA (length=1168) Species: 9606 (Homo sapiens) [Search protein sequence]
MDQKILSLAAEKTADKLQEFLQTLREGDLTNLLQNQAVKGKVAGALLRAI
FKGSPCSEEAGTLRRRKIYTCCIQLVESGDLQKEIVSEIIGLLMLEAHHF
PGPLLVELANEFISAVREGSLVNGKSLELLPIILTVLATKKENLAYLSGE
ECKKQLINTLCSGRWDQQYVIQLTSMFKDVPLTAEEVEFVVEKALSMFSK
MNLQEIPPLVYQLLVLSSKGSRKSVLEGIIAFFSALDKQHNEEQSPSGEL
RHVEGTIILHIVFAIKLDYELGRELVKHLKVGQQGDSNNNLSPFSIALLL
SVTRIQRFQDQVLDLLKTSVVKSFKDLQLLQGSKFLQNLVPHRSYVSTMI
LEVVKNSVHSWDHVTQGLVELGFILMDSYGPKKVLPSLSRMPNQHACKLG
ANILLETFKIHEMIRQEILEQVLNRVVTRASSPISHFLDLLSNIVMYAPL
VLQNCSSKVTEAFDYLSFLPLQTVQRLLKAVQPLLKVSMSMRDCLILVLR
KAMFANQLDARKSAVAGFLLLLKNFKVLYNSVANETFCLEIMDSLRRCLS
QQADVRLMLYEGFYDVLRRNSQLANSVMQTLLSQLKQFYEPEPDLLPPLK
LEACILTQGDQISLQEPLDYLLCCIQHCLAWYKNTVIPEAFYEDLDDILE
SITNRMIKSELEDFELDKSADFSQSTSIGIKNNISAFLVMGVCEVLIEYN
FSISSFSKNRFEDILSLFMCYKKLSDILNEKAGKAKTKMANKTSDSLLSM
KFVSSLLTALFRDSIQSHQESLSVLRSSNEFMRYAVNVALQKVQQLKETG
HVSGPDGQNPEKIFQNLCDLTRVLLWRYTSIPTSVEESGKKEKGKSISLL
CLEGLQKIFSAVQQFYQPKIQQFLRALVSVTQRTAFQIRQFQRSLLNLLS
SQEEDFNSKEALLLVTVLTSLSKLLEPSSPQFVQMLSWTSKICKENSRED
ALFCKSLMNLLFSLHVSYKSPVILLRDLSQDIHGHLGDIDQDVEVEKTNH
FAIVNLRTAAPTVCLLVLSQAEKVLEEVDWLITKLKGQVPNQPVEKAIIM
QLGTLLTFFHELVQTALPSGSCVDTLLKDLCKMYTTLTALVRYYLQVCQS
SGGIPKNMEKLVKLSGSHLTPLCYSFISYVQNKSTKPIPNLIFAIEQYEK
FLIHLSKKSKVSLMQHMK
3D structure
PDB6vaa DNA clamp function of the monoubiquitinated Fanconi anaemia ID complex.
ChainA
Resolution3.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A G790 K793 G733 K736
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0070182 DNA polymerase binding
Biological Process
GO:0006281 DNA repair
GO:0031398 positive regulation of protein ubiquitination
GO:0036297 interstrand cross-link repair
Cellular Component
GO:0000785 chromatin
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0016020 membrane
GO:1990391 DNA repair complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6vaa, PDBe:6vaa, PDBj:6vaa
PDBsum6vaa
PubMed32269332
UniProtQ9NVI1|FANCI_HUMAN Fanconi anemia group I protein (Gene Name=FANCI)

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