Structure of PDB 6v7b Chain A

Receptor sequence
>6v7bA (length=119) Species: 1805492 (Pyrobaculum filamentous virus 1) [Search protein sequence]
IAETLTEKHTLGIEKVVATDSWRVGITSREKKLERINISAEISRRIQDEA
IAYARNKGIPYLPGINGIAWKLLRLKWLGYTDQINVVMRTVPAEWRDFLT
QIMENTQMESMYSELRKVR
3D structure
PDB6v7b Structure of a filamentous virus uncovers familial ties within the archaeal virosphere.
ChainA
Resolution3.4 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A H18 K24 R38 S52 R53 Q56 P72 N75 R83 H9 K15 R29 S43 R44 Q47 P63 N66 R74
BS02 dna A K17 H18 G21 V25 W31 I35 K41 R44 G76 I77 W79 R83 K8 H9 G12 V16 W22 I26 K32 R35 G67 I68 W70 R74
Gene Ontology
Cellular Component
GO:0019029 helical viral capsid
GO:0044423 virion component

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:6v7b, PDBe:6v7b, PDBj:6v7b
PDBsum6v7b
PubMed32368353
UniProtA0A6M3VZT9|CAPS1_PFV2 Major capsid protein 1 (Gene Name=PFV2_gp20)

[Back to BioLiP]