Structure of PDB 6ug1 Chain A

Receptor sequence
>6ug1A (length=477) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
RNCSSNEERKRRKYFHMLYLVCLMVHGFIRNEWINSKRLSRKLSNLVPEK
VFELLHPQKDEELPLRSTRKLLDGLKKCMELWQKHWKITKKYDNEGLYMR
TWKEIEMSANNKRKFKTLKRSDFLRAVSKGHGDPDISVQGFVAMLRACNV
NARLIMSCQPPDFTNMKIDTSLNAYKDMVKYPIFWCEVWDKFSKKWITVD
PVNLKTIEQVRLHSKLAPKGVACCERNMLRYVIAYDRKYGCRDVTRRYAQ
WMNSKVRKRRITKDDFGEKWFRKVITALHHRKRTKIDDYEDQYFFRRDES
EGIPDSVQDLKNHPYYVLEQDIKQTQIVKPGCKECGYLKVHGKVGKVLKV
YAKRDIADLKSARQWYMNGRILKGSRCKKVIAERLYSFEDTELYIPPLAS
GEITKNTFGNIEVFAPTMIPGNCCLVENPVAIKAARFLGVEFAPAVTSFK
KPVLSGIVVAKWLREAIETAIDGIEFI
3D structure
PDB6ug1 Impact of DNA sequences on DNA 'opening' by the Rad4/XPC nucleotide excision repair complex.
ChainA
Resolution2.833 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A R129 N134 V352 S437 V438 Q439 Q495 R1 N6 V221 S306 V307 Q308 Q364
BS02 dna A N130 C131 N293 M294 K295 N443 K454 N2 C3 N165 M166 K167 N312 K323
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003684 damaged DNA binding
Biological Process
GO:0006289 nucleotide-excision repair
Cellular Component
GO:0005634 nucleus

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6ug1, PDBe:6ug1, PDBj:6ug1
PDBsum6ug1
PubMed34428697
UniProtP14736|RAD4_YEAST DNA repair protein RAD4 (Gene Name=RAD4)

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