Structure of PDB 6ssc Chain A

Receptor sequence
>6sscA (length=149) Species: 36845 (Clostridium intestinale) [Search protein sequence]
TPKIVEVNYTWATPLSYNFNPNMIVYHHTVDNNMTPQKIDEIHKQRGWSG
IGYHFYIRKDGTIYRGRPENAVGSHAPGVNARAFGIASEGNFNEEYVTPQ
QMTSLIALSRYLMNKYNITDLKRHKDVRQTECPGNNFPFEEIKAKLNVK
3D structure
PDB6ssc Molecular Characterization of a Novel Lytic Enzyme LysC from Clostridium intestinale URNW and Its Antibacterial Activity Mediated by Positively Charged N -Terminal Extension.
ChainA
Resolution1.21 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.5.1.28: N-acetylmuramoyl-L-alanine amidase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 ZN A H50 H147 C155 H27 H124 C132
Gene Ontology
Molecular Function
GO:0008270 zinc ion binding
GO:0008745 N-acetylmuramoyl-L-alanine amidase activity
GO:0046872 metal ion binding
Biological Process
GO:0009253 peptidoglycan catabolic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:6ssc, PDBe:6ssc, PDBj:6ssc
PDBsum6ssc
PubMed32664473
UniProtU2NM08

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