Structure of PDB 6sm3 Chain A

Receptor sequence
>6sm3A (length=482) Species: 242619 (Porphyromonas gingivalis W83) [Search protein sequence]
CELDRDPEGKDFQQPYTSFVQTKQNRDGLYALLRNTENPRMHFYQELQSD
MYCTTITDGNSLAPFVNWDLGILNDHGRADEDEVSGIAGYYFVYNRLNQQ
ANAFVNNTEAALQNQVYKNSTEIANAKSFLAEGKVLQALAIWRLMDRFSF
HESVTEVNSGAKDLGVILLKEYNPGYIGPRATKAQCYDYILSRLSEAIEV
LPENRESVLYVSRDYAYALRARIYLALGEYGKAAADAKMVVDKYPLIGAA
DASEFENIYRSDANNPEIIFRGFASATLGSFTATTLNGAAPAGKDIKYNP
SAVPFQWVVDLYENEDFRKSVYIAKVVKKDKGYLVNKFLEDKAYRDVQDK
PNLKVGARYFSVAEVYLILVESALQTGDTPTAEKYLKALSKARGAEVSVV
NMEALQAERTRELIGEGSRLRDMVRWSIPNNHDAFETQPGLEGFANTTPL
KAQAPVGFYAYTWEFPQRDRQTNPQLIKNWPI
3D structure
PDB6sm3 Structural and functional insights into oligopeptide acquisition by the RagAB transporter from Porphyromonas gingivalis.
ChainA
Resolution3.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A G78 N79 G59 N60
Gene Ontology

View graph for
Cellular Component
External links
PDB RCSB:6sm3, PDBe:6sm3, PDBj:6sm3
PDBsum6sm3
PubMed32393857
UniProtF5H948

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