Structure of PDB 6sda Chain A

Receptor sequence
>6sdaA (length=503) Species: 264462 (Bdellovibrio bacteriovorus HD100) [Search protein sequence]
NFYQDGPQLSNTFRSDEALQKILKSLLPADAQKVALPHLEHLGERAVTDM
LTWAQEAESQPPVHVPFDPWGRRIDDIKTSHGWKALEKVAAEEGIVATAY
DRRFGAASRVYQMALLYLYSPSSAIFSCPLAMTDGAARALELYADADLKA
RVLPHLLSRDPKTFWTAGQWMTERTGGSDVSGTSTDAHPFTGTSEFGATH
SLHGTKWFTSATTSQMALTLARPDGAAPGSRGLSLFFLELRNDKGELNHI
QIHRLKDKLGTKALPTAELSLQGTPARMIGGVGEGVKRIASVLNITRIYN
SICAVGHIRRALDLAQDYSGKRQAFGKLLKDHPLHKSTLDSLEADFRKCI
AFSFFVANLLGQEEVGEASASEKILLRVLTPILKLYTAKKSIHISSEVVE
MFGGAGYVEDTGIPRLLRDAQVFSIWEGTTNVLSLDMLRAFEKDQAGQIL
EQFLVLNEAGSEELVRLQKLLTLSGEQKEQHAREIAFLIGNAVARIAMKK
YSL
3D structure
PDB6sda Target highlights in CASP13: Experimental target structures through the eyes of their authors.
ChainA
Resolution1.87 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) M173 T174 T298 R441
Catalytic site (residue number reindexed from 1) M171 T172 T296 R439
Enzyme Commision number 1.3.99.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FAD A Q171 M173 T174 G179 S180 F210 W428 T431 L437 Q169 M171 T172 G177 S178 F208 W426 T429 L435
BS02 FAD A R324 F327 L331 H334 E402 M403 G406 R322 F325 L329 H332 E400 M401 G404
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0003995 acyl-CoA dehydrogenase activity
GO:0016491 oxidoreductase activity
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors

View graph for
Molecular Function
External links
PDB RCSB:6sda, PDBe:6sda, PDBj:6sda
PDBsum6sda
PubMed31442339
UniProtQ6MJ59

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