Structure of PDB 6rtg Chain A

Receptor sequence
>6rtgA (length=503) Species: 349967 (Yersinia mollaretii ATCC 43969) [Search protein sequence]
NNFITHNLHTVWIGGPLPDITKSYLKVWRDINPDYTHITWIDTDNKFVAL
YNNAVKELREYTLKQYLVGDSNATANDYYDQAVQIERGVRENVYLPHGND
IERIKTIKKIAGSLGDNKVQEYRTKIETIESSFVEMIDGGHYQHVSALFE
QFSEMDNLRATALKQIYEREINDRGNLAAASDILRLVALQTQGGVYIDTD
LLPHIDWDLIESTKLFLDNNSVERVYSKEIYLEIEKYKQLTGSKTNKIRS
GLTKSQINEIQRLTEENNLFKHLNELEKNCFYSDNSVRGWTNAMLACNEN
NGFMNALMDRIILNYTILDEFIISNIVTDGEMLNFTEKMSAQFGLNAEHE
GSFIPSLANYYKDSIVPNSPQATATLFMTGPTVLDTVIRVEEAVRRGIVK
KEAIASLYTVEETFSSWSISQFYDKAAFYLDKVKFDISLNSAEEGILRDS
CFDVIQQSKEQATHLPDIAIKFLESLNNFTWKQLELLIKASEFSDQYKTL
ATL
3D structure
PDB6rtg Inverse control of Rab proteins byYersiniaADP-ribosyltransferase and glycosyltransferase related to clostridial glucosylating toxins.
ChainA
Resolution1.9 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 UDP A V22 W23 I24 L190 S194 D211 T212 D213 S430 S431 W432 V11 W12 I13 L177 S181 D198 T199 D200 S415 S416 W417
BS02 MN A D213 E427 D200 E412
BS03 K A D213 E426 E427 F429 S430 D200 E411 E412 F414 S415
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sun Feb 23 08:30:22 2025

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '6rtg', asym_id = 'A', title = 'Inverse control of Rab proteins byYersiniaADP-ri...ase related to clostridial glucosylating toxins. '
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='6rtg', asym_id='A', title='Inverse control of Rab proteins byYersiniaADP-ri...ase related to clostridial glucosylating toxins. ')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0016757', uniprot = '', pdbid = '6rtg', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0016757', uniprot='', pdbid='6rtg', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>