Structure of PDB 6rd3 Chain A

Receptor sequence
>6rd3A (length=342) Species: 573 (Klebsiella pneumoniae) [Search protein sequence]
GAEIYNKDGNKLDLYGKIDGLHYFSDDKSVDGDQTYMRVGVKGETQINDQ
LTGYGQWEYNVQANNTESSSDQAWTRLAFAGLKFGDAGSFDYGRNYGVVY
DVTSWTDVLPEFGGDTYGSDNFLQSRANGVATYRNSDFFGLVDGLNFALQ
YQGKNGSVSGEGATNNGRGWSKQNGDGFGTSLTYDIISAGFAYSHSKRTD
EQNSVPALGRGDNAETYTGGLKYDANNIYLASQYTQTYNATRAGSLGFAN
KAQNFEVVAQYQFDFGLRPSVAYLQSKGKDLERGYGDQDILKYVDVGATY
YFNKNMSTYVDYKINLLDDNSFTRNAGISTDDVVALGLVYQF
3D structure
PDB6rd3 OmpK36-mediated Carbapenem resistance attenuates ST258 Klebsiella pneumoniae in vivo.
ChainA
Resolution1.98 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 C8E A Y91 Y150 Y92 Y151
BS02 C8E A Y219 Q238 Y240 Y217 Q236 Y238
BS03 C8E A Y236 F257 Y234 F255
BS04 C8E A G299 A300 Y314 G297 A298 Y312
BS05 MG A R212 N241 N252 R210 N239 N250
Gene Ontology
Molecular Function
GO:0015288 porin activity
GO:0046872 metal ion binding
Biological Process
GO:0006811 monoatomic ion transport
GO:0034220 monoatomic ion transmembrane transport
Cellular Component
GO:0009279 cell outer membrane
GO:0016020 membrane
GO:0046930 pore complex

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Biological Process
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Cellular Component
External links
PDB RCSB:6rd3, PDBe:6rd3, PDBj:6rd3
PDBsum6rd3
PubMed31477712
UniProtD6QLY0

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