Structure of PDB 6r9o Chain A

Receptor sequence
>6r9oA (length=594) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
SDIQTYTSINKYEVPPAYSRLPLTSDNFDFTPFNNTEYSGLDPDVDNHYT
NAIIQLYRFIPEMFNFVVGCLKDENFETTLLTDLGYLFDMMERSHGKICS
SSNFQASLKSLTDKRQEPQEHLEEYLESLCIESIKRNMPQKFNRFLLSQL
IKEEAQTVNHNITLNQCFGLETEIRTECSCDHYDTTVKLLPSLSISGINK
QNILPYIEYAMKNVTQKNSETITQECTVKNLPSVLSLELSLLDTEFSNIR
SSKNWLTSEFYGSIIKNKAVLRSTASELKGTSHIFKYELNGYVAKITDNN
NETRLVTYVKKYNPKENCFKWLMFNDYLVVEITEEEALKMTYPWKTPEII
IYCDAEELRKPFFSVDTYSINYDILFRDYFANGIEYKLLTHDEAPKSGTL
VAIDAAFVSLQSELCEIRPKRTALARISIIRGEEGELYGVPFVDDYVVNT
NHIEDYLTRYSGILPGDLDPEKSTKRLVRRNVVYRKVWLLMQLGCVFVGH
GLNNDFKHININVPRNQIRDTAIYFLQGKRYLSLRYLAYVLLGMNIQEGN
HDSIEDAHTALILYKKYLHLKEKAIFEKVLNSVYEEGRAHNFKV
3D structure
PDB6r9o The intrinsic structure of poly(A) RNA determines the specificity of Pan2 and Caf1 deadenylases.
ChainA
Resolution3.319 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.13.4: poly(A)-specific ribonuclease.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna A A912 F913 Y975 S976 N1019 R1045 Y1046 L1047 S1048 L1049 A406 F407 Y460 S461 N504 R530 Y531 L532 S533 L534
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding

View graph for
Molecular Function
External links
PDB RCSB:6r9o, PDBe:6r9o, PDBj:6r9o
PDBsum6r9o
PubMed31110294
UniProtP53010|PAN2_YEAST PAN2-PAN3 deadenylation complex catalytic subunit PAN2 (Gene Name=PAN2)

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