Structure of PDB 6r9m Chain A

Receptor sequence
>6r9mA (length=600) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
TSDIQTYTSINKYEVPPAYSRLPLTSDNFDFTPFNNTEYSGLDPDVDNHY
TNAIIQLYRFIPEMFNFVVGCLKDENFETTLLTDLGYLFDMMERSHGKIC
SSSNFQASLKSLTDKREPQEHLEEYLESLCIESIKRNMPQKFNRFLLSQL
IKEEAQTVNHNITLNQCFGLETEIRTECSCDHYDTTVKLLPSLSISGINK
TVIKQLGQNILPYIEYAMKNVTQKNSTQECTVKNLPSVLSLELSLLDTEF
SNIRSSKNWLTSEFYGSIIKNKAVLRSTASELKGTSHIFKYELNGYVAKI
TDNNNETRLVTYVKKYNPKENCFKWLMFNDYLVVEITEEEALKMTYPWKT
PEIIIYCDAEELRKPFFSVDTYSINYDILFRDYFANGREYKLLTHDEAPK
SGTLVAIDAAFVSLQSELCEIIRPKRTALARISIIRGEEGELYGVPFVDD
YVVNTNHIEDYLTRYSGILPGDLDPEKSTKRLVRRNVVYRKVWLLMQLGC
VFVGHGLNNDFKHININVPRNQIRDTAIYFLQGKRYLSLRYLAYVLLGMN
IQEGNHDSIEDAHTALILYKKYLHLKEKAIFEKVLNSVYEEGRAHNFKVP
3D structure
PDB6r9m The intrinsic structure of poly(A) RNA determines the specificity of Pan2 and Caf1 deadenylases.
ChainA
Resolution3.329 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.13.4: poly(A)-specific ribonuclease.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna A D910 F913 L972 Y975 R1045 Y1046 S1048 D408 F411 L462 Y465 R535 Y536 S538
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding

View graph for
Molecular Function
External links
PDB RCSB:6r9m, PDBe:6r9m, PDBj:6r9m
PDBsum6r9m
PubMed31110294
UniProtP53010|PAN2_YEAST PAN2-PAN3 deadenylation complex catalytic subunit PAN2 (Gene Name=PAN2)

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