Structure of PDB 6r9j Chain A

Receptor sequence
>6r9jA (length=595) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
SDIQTYTSINKYEVPPAYSRLPLTSTDNFDFTPFNNTEYSGLDPDVDNHY
TNAIIQLYRFIPEMFNFVVGCLKDENFETTLLTDLGYLFDMMERSHGKIC
SSSNFQASLKSLTDKPQEHLEEYLESLCIESIKRNMPQKFNRFLLSQLIK
EEAQTVNHNITLNQCFGLETEIRTECSCDHYDTTVKLLPSLSISGINKTV
IKQLQNILPYIEYAMKNVTQKNSETITQECTVKNLPSVLSLELSLLDTEF
SNIRSSKNWLTSEFYGSIIKNKAVLRSTASELKGTSHIFKYELNGYVAKI
TDNNNETRLVTYVKKYNPKENCFKWLMFNDYLVVEITEEEALKMTYPWKT
PEIIIYCDAEELRKPFFSVDTYSINYDILFRDYARREYKLLTHDEAPKSG
TLVAIDAAFVSLQSELCEPKRTALARISIIRGEEGELYGVPFVDDYVVNT
NHIEDYLTRYSGILPGDLDPEKSTKRLVRRNVVYRKVWLLMQLGCVFVGH
GLNNDFKHININVPRNQIRDTAIYFLQGKRYLSLRYLAYVLLGMNIQEGN
HDSIEDAHTALILYKKYLHLKEKAIFEKVLNSVYEEGRAHNFKVP
3D structure
PDB6r9j The intrinsic structure of poly(A) RNA determines the specificity of Pan2 and Caf1 deadenylases.
ChainA
Resolution3.326 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.13.4: poly(A)-specific ribonuclease.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna A D910 F913 L972 Y975 H1015 N1019 R1045 Y1046 S1048 L1049 D406 F409 L457 Y460 H500 N504 R530 Y531 S533 L534
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding

View graph for
Molecular Function
External links
PDB RCSB:6r9j, PDBe:6r9j, PDBj:6r9j
PDBsum6r9j
PubMed31110294
UniProtP53010|PAN2_YEAST PAN2-PAN3 deadenylation complex catalytic subunit PAN2 (Gene Name=PAN2)

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