Structure of PDB 6qv3 Chain A

Receptor sequence
>6qv3A (length=1657) Species: 209285 (Thermochaetoides thermophila) [Search protein sequence]
GTTKRVFKGYEEIHVPPPKKRSDPTDQNIPVTELPEWARIPFNTTKTLNK
IQSKCFPTAFLDDGNMLVCAPTGSGKTNVAMLTMLREIGKNRNEKGEIDL
DAFKIVYIAPLKALVQEQVGNFGKRLEPYGIKVSELTGDRQLTKQQISET
QVIVTTPEKWDVITRKATDISYTNLVRLIIIDEIHLLHDDRGPVLESIVS
RTIRRTEQTGEPVRIIGLSATLPNYRDVASFLRVDFEKGLFYFDGSYRPC
PLRQEFIGVQLKTMNDITYQKVLEHVGQNRNQMLIFVHSRKETAKTAKYI
RDKALEMDTINQILKHDAGTREVLQEAASSVNNTDLKDLLPYGFGIHHAG
MSRADRTDVEDLFASGHIQVLVCTATLAWGVNLPAHTVIIKGTQVYSPEK
GSWVELSPQDVLQMLGRAGRPQYDTYGEGIIITTQGEIPYYLSLLNQQLP
IESQLVSKLVDSLNAEIVLGNVRNRDEGVEWLGYTYLFVRMLRSPGLYSV
GAEYEDDVALEQKRVDLIHSAAMVLKKSNLIKYDEKTGKMQATELGRIAS
HYYISHESMDTYNKLIHPAMNDVELFRVFAQSGEFKYIPVRQEEKLELAK
LLARVPIPVKESIEEPTAKINVLLQAYISRLKLEGLALMADMVYVTQSAG
RILRAIFEICLKKGWASVAKLALNMCKMAEKRMWPTMSPLRQYPTCPAEI
IKKAERMDVPWSSYFDLDPPRMGELLGMPKAGKTVCALVSKFPRVEIQGN
VQPMTRSMLRIELTITPNFQWDVELHGVTESFWILVEDCDGEEILFHDVF
ILRKDLAEAEENEHTVEFTVPISEPMPPNYFISVISDRWMHSETRMPVSF
QKLILPERFPPHTELLDLQPLPVSALKAKDYAALYPNWQQFNKIQTQTFN
SLYNTDNNVLVAAPTGSGKTVCAEFALLRHWAKKDAGRAVYIAPFQELVD
LRFQDWQKRLSHLRGGKEIVKLTGETTTDLKLLEQGDLILATPLQWDVLS
RQWKRRKNVQTVELFIADDLHMLGGQMGYIYEIVVSRMHFIRTQTELPMR
IVGLSVSLANARDIGEWIDAKKHDIYNFSPHVRPVPLELHIQSYTIPHFP
SLMLAMAKPTYLAITQLSPDQPAIVFVPSRKQTRATARDLLTACLADDDE
DRFLHVEVDQIRKLLDHVQEEALAEALSHGVGYYHEALSQSDKRIVKHLY
NNGAIQVLIASRDVCWELDFTAHLVVVMGTQFFEGKEHRYIDYPLSEVLQ
MFGKALQPSKDGRSRGVLMLPAVKREYYKKFLNEALPVESHLHNFLPDAF
VTEISTKMIESGEDAINWATFTYFYRRLLANPSYYGLQDPTHDGLSQYLS
DLVETTLKQLSDARIIEMDEDEGTVAPLNAAMIAAYYNISYMTMEMFLLS
LSHKSKLRTILEIVTAATEFESIQTRRHEEGILKRIYDHVPVKMNNPVWD
SAHFKAFVLVQAHFSRMNLPIDLAKDQEVILQKILSLLSAIVDILSSEGH
LNALNAMEMSQMVVQAMWDRDSPLKQIPNFTPEVVKVANKYGINDIFDFM
EQMNPEENPNYASLVKDLGLTQAQLAQAANFTNNKYPDITLPAYLKIHIE
REDPTVHAPFYPGKKSENWWLVVTLLAIKRVTVGKELNVKLEFVFLMSDS
YVGVDQD
3D structure
PDB6qv3 Molecular Mechanism Underlying Inhibition of Intrinsic ATPase Activity in a Ski2-like RNA Helicase.
ChainA
Resolution2.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ADP A T526 T528 L529 Q533 G554 S555 G556 K557 T558 T45 T47 L48 Q52 G73 S74 G75 K76 T77
BS02 ADP A W1376 Q1383 G1404 G1406 K1407 T1408 W888 Q895 G916 G918 K919 T920
BS03 ADP A F1288 I1289 R1291 H1586 H1726 Y1728 F800 I801 R803 H1098 H1238 Y1240
BS04 MN A D663 E664 D182 E183
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0005524 ATP binding
GO:0016887 ATP hydrolysis activity

View graph for
Molecular Function
External links
PDB RCSB:6qv3, PDBe:6qv3, PDBj:6qv3
PDBsum6qv3
PubMed31859026
UniProtG0S0B9

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