Structure of PDB 6qtq Chain A

Receptor sequence
>6qtqA (length=304) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
TRYSRLRVIAEIRHNIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEP
QCPIVEMSTRSKLSCLSWNKHEKNHIASSDYEGIVTVWDVTTRQSLMEYE
EHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEASVINIDMKANICC
VKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSN
NELASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEYLACGSE
TNEVYVYHKEITRPVTSHRFGGSYFISAVCWKSDSPTMLTANSQGTIKVL
VLAA
3D structure
PDB6qtq Plant photoreceptors and their signaling components compete for COP1 binding via VP peptide motifs.
ChainA
Resolution1.3 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.3.2.27: RING-type E3 ubiquitin transferase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A V391 K422 W467 C509 T568 K593 N594 F595 V34 K62 W107 C149 T208 K233 N234 F235
Gene Ontology
Molecular Function
GO:0061630 ubiquitin protein ligase activity

View graph for
Molecular Function
External links
PDB RCSB:6qtq, PDBe:6qtq, PDBj:6qtq
PDBsum6qtq
PubMed31304983
UniProtP43254|COP1_ARATH E3 ubiquitin-protein ligase COP1 (Gene Name=COP1)

[Back to BioLiP]