Structure of PDB 6pt9 Chain A

Receptor sequence

>6pt9A (length=472) Species: 1872678 (Pseudoalteromonas fuliginea) [Search protein sequence]

KPNVLILLFDDMRFDTFSYRNGPVSTPNIDALANEGTRFDQAMTSTGLSS
PSRAAMFTGRWGHKTGLDDNVGLYHSRLSELSLSEGSVIKRATSIGYDVS
YVGKWHLGAQGPALRGANFMWGHDKDEERNGRPFTPYQTQKNVARMNAGE
RDKNGEKHDYYKTLPGTYADTVTAKEVNEGKLMLQNAAKSDKPFFGIVSF
EQPHPPYRVPEPYASMYDYKDIKLPKNFGIKRKHKPMAQDDIWWPWHDVS
HMSETDWRKAHSFYYGAIAMIDHAVGELINTAKEEGLYDDLHIILVGDQG
SMLGEHNLYDKGPYAYDELMRMPLIIRDPSLEPKIINRQVSMLDIAPTLR
QWMTLPLDGDEDGRSLLPLMKQGDSADAGKDDISLYAYEWYNGGWFGIRA
IRTPEMKFVWNPGDSRDELYDLKNDPYEITNQIDNPKYKKQLTDLVHKMA
GELNRIDDPSLTKFNHHMKAFL

3D structure

PDB

6pt9 Insights into the kappa / iota-carrageenan metabolism pathway of some marinePseudoalteromonasspecies.

Chain

Resolution

1.66 Å

3D
structure

Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	G4S	A	K139 H141 H239	K104 H106 H204
BS02	9RN	A	H239 W279 W281 D345 Y426 N427	H204 W244 W246 D310 Y391 N392
BS03	CA	A	D45 D46 S84 D333 Q334	D10 D11 S49 D298 Q299

External links

PDB	RCSB:6pt9, PDBe:6pt9, PDBj:6pt9
PDBsum	6pt9
PubMed	31886414

[Back to BioLiP]