Structure of PDB 6pt6 Chain A

Receptor sequence

>6pt6A (length=473) Species: 1872678 (Pseudoalteromonas fuliginea) [Search protein sequence]

KKPNVLILLFDDMRFDTFSYRNGPVSTPNIDALANEGTRFDQAMTSTGLS
SPSRAAMFTGRWGHKTGLDDNVGLYHSRLSELSLSEGSVIKRATSIGYDV
SYVGKWHLGAQGPALRGANFMWGHDKDEERNGRPFTPYQTQKNVARMNAG
ERDKNGEKHDYYKTLPGTYADTVTAKEVNEGKLMLQNAAKSDKPFFGIVS
FEQPHPPYRVPEPYASMYDYKDIKLPKNFGIKRKHKPMAQDDIWWPWHDV
SHMSETDWRKAHSFYYGAIAMIDHAVGELINTAKEEGLYDDLHIILVGDQ
GSMLGEHNLYDKGPYAYDELMRMPLIIRDPSLEPKIINRQVSMLDIAPTL
RQWMTLPLDGDEDGRSLLPLMKQGDSADAGKDDISLYAYEWYNGGWFGIR
AIRTPEMKFVWNPGDSRDELYDLKNDPYEITNQIDNPKYKKQLTDLVHKM
AGELNRIDDPSLTKFNHHMKAFL

3D structure

PDB

6pt6 Insights into the kappa / iota-carrageenan metabolism pathway of some marinePseudoalteromonasspecies.

Chain

Resolution

2.25 Å

3D
structure

Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	G4S	A	L108 K139 H141 F169 H239	L74 K105 H107 F135 H205
BS02	DGS	A	S84 N105 H141 H239 W279 W281 D345 K346 Y426 N427	S50 N71 H107 H205 W245 W247 D311 K312 Y392 N393
BS03	CA	A	D45 D46 S84 D333 Q334	D11 D12 S50 D299 Q300

External links

PDB	RCSB:6pt6, PDBe:6pt6, PDBj:6pt6
PDBsum	6pt6
PubMed	31886414

[Back to BioLiP]