Structure of PDB 6pre Chain A

Receptor sequence
>6preA (length=386) Species: 170187 (Streptococcus pneumoniae TIGR4) [Search protein sequence]
DGTVTIEYFNQKKEMTKTLEEITRDFEKENPKIKVKVVNVPNAGEVLKTR
VLAGDVPDVVNIYPQSIELQEWAKAGVFEDLSNKDYLKRVKNGYAEKYAV
NEKVYNVPFTANAYGIYYNKDKFEELGLKVPETWDEFEQLVKDIVAKGQT
PFGIAGADAWTLNGYNQLAFATATGGGKEANQYLRYSQPNAIKLSDPIMK
DDIKVMDILRINGSKQKNWEGAGYTDVIGAFARGDVLMTPNGSWAITAIN
EQKPNFKIGTFMIPGKEKGQSLTVGAGDLAWSISATTKHPKEANAFVEYM
TRPEVMQKYYDVDGSPTAIEGVKQAGEDSPLAGMTEYAFTDRHLVWLQQY
WTSEADFHTLTMNYVLTGDKQGMVNDLNAFFNPMKA
3D structure
PDB6pre Molecular analysis of an enigmaticStreptococcus pneumoniaevirulence factor: The raffinose-family oligosaccharide utilization system.
ChainA
Resolution2.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GLC A N72 W190 N42 W160
BS02 GLA A Q41 K43 N72 G74 Y93 W190 Q11 K13 N42 G44 Y63 W160
BS03 GLA A K42 E44 Y93 W274 D308 K12 E14 Y63 W244 D278
BS04 GLA A Y93 Q95 N193 W376 Q378 E384 Y63 Q65 N163 W346 Q348 E354
Gene Ontology
Biological Process
GO:0055085 transmembrane transport

View graph for
Biological Process
External links
PDB RCSB:6pre, PDBe:6pre, PDBj:6pre
PDBsum6pre
PubMed31591266
UniProtA0A0H2URJ7

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