Structure of PDB 6ppj Chain A

Receptor sequence
>6ppjA (length=901) Species: 1772 (Mycolicibacterium smegmatis) [Search protein sequence]
STLLEPGSNGVVRLLGGPGTGKSSLLVDTAVQHILDPESVLLLTGSARLR
TAARAAITARLGVVREPLVRTVHSYAFAVLRLAAQPPPRLITSAEQDGII
RELLAGDLEDGPVGWPEQLWPALTTAGFATELRDLMARCTERGVDPIALQ
RLGRTAKRPEWLAAGRFAQAYEQIMLLPALGAAELVGAALEALGADDELL
DTERNRIKLLLVDDAQHLDPQAARLVRALAAGTGLTVIAGDPDQSVVLLR
DDTHPAITLTQSYRCAPEIASAITGLGQRLPTRHWTGNPQREGTVTVRLA
ASTHAEGTMIADALRRAHLVDGIPWSQMAVIVRSVPALARALTAAGVPVQ
DVPVGRQPAAAALLTVLDVTATGHLDADSAVALLTGPIGRVDPVTLRQLR
RALRRAPPRDFGDLLVDAIEREPKGLSAEHARTLRRLRAVLTAARRSPRY
TLWQAWHASGLQRRWLAASVGAQADRDLDAVTTLFDVADQYVNRLRGLVD
HVTRLAEAVAVLSVHGALAGEWDFVVIAGVQEGLWPNMIPRGGVLGTQHL
VDVLDGVADMTDRTVSTRAPLVAEERRLLMAAMGRARTRVMITAVDSLLP
SPFCAEISAWATPPLVAPRVLAPSALVGRLRAVVCAPAVDDDARACAAAQ
LARLAAAGVPGADPSQWHAMTSLTTEEPLWSEHVVTLSPSTLQMLTDCPL
RWLLERHGGDDGDVRSTVGSLVHALVSETESQLVNELEKVWDDLPYDAKW
YSDNELARHRAMLETFTRWREDTRRQLTEVATEIPVEGIVVEPPGVRVRG
RLDRLERDLVVVALKTGKSPVTKDDAQNHAQLAMYQLAVAAGLGGKLVYL
GKATEREQDPKRAEWLETVGEAAAATAGPRFVARVNNGCANCPVRSSCPA
Q
3D structure
PDB6ppj Structures and single-molecule analysis of bacterial motor nuclease AdnAB illuminate the mechanism of DNA double-strand break resection.
ChainA
Resolution3.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 5.6.2.4: DNA 3'-5' helicase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 SF4 A C807 R810 R1022 C1027 C1030 V1032 C1036 C698 R701 R884 C889 C892 V894 C898
BS02 ANP A G32 T33 G34 K35 S36 S37 Y313 R679 G19 T20 G21 K22 S23 S24 Y263 R585
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003678 DNA helicase activity
GO:0004386 helicase activity
GO:0004527 exonuclease activity
GO:0005524 ATP binding
GO:0016787 hydrolase activity
GO:0016853 isomerase activity
GO:0043138 3'-5' DNA helicase activity
Biological Process
GO:0000725 recombinational repair
GO:0006281 DNA repair
GO:0032508 DNA duplex unwinding
Cellular Component
GO:0005829 cytosol
GO:0033202 DNA helicase complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6ppj, PDBe:6ppj, PDBj:6ppj
PDBsum6ppj
PubMed31740608
UniProtA0QTR9

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