Structure of PDB 6pef Chain A

Receptor sequence

>6pefA (length=219) Species: 9544 (Macaca mulatta)

VQLQESGPAVMKPSETLSLTCAVSGGSISGDYGWSWIRQAPGKGLEWIAI
IFGSSGSTYYSPSLKSRVTISKDTSKNQFSLKLNSVTAADTAVYFCAGSP
VRQREQDYWGQGVLVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKD
YFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTY
VCNVNHKPSNTKVDKRVEI

3D structure

• PDB: 6pef Modular recognition of antigens provides a mechanism that improves vaccine-elicited antibody-class frequencies
• Chain: A
• Resolution: 2.004 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	A	S100 R105 D108	S99 R104 D107

External links

• PDB: RCSB:6pef, PDBe:6pef, PDBj:6pef
• PDBsum: 6pef