Structure of PDB 6p8d Chain A

Receptor sequence

>6p8dA (length=211) Species: 10090 (Mus musculus) [Search protein sequence]

QVQLQQSGAELAKPGASVILSCKASDYTFTRYWMNWVRQRPGQGLECIGY
IDPGNGYTKYNQKFKDKATMTADKSSSTAYLQLRSLTYEDSAVYYCASGY
VAFHYWGQGTTLTVSSAKTTPPSVYPLAPNSMVTLGCLVKGYFPEPVTVT
WNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASS
TKVDKKIVPRD

3D structure

PDB

6p8d Modular recognition of antigens provides a mechanism that improves vaccine-elicited antibody-class frequencies

Chain

Resolution

2.102 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	A	R31 W33 N35 Y50 D52 Y100 A102	R31 W33 N35 Y50 D52 Y100 A102

External links

PDB	RCSB:6p8d, PDBe:6p8d, PDBj:6p8d
PDBsum	6p8d
PubMed

[Back to BioLiP]