Structure of PDB 6p81 Chain A

Receptor sequence
>6p81A (length=440) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
ETHINLKVSDGSSEIFFKIKKTTPLRRLMEAFAKRQGKEMDSLRFLYDGI
RIQADQTPEDLDMEDNDIIEAHREQIGGMKFTVEREHLLKPLQQVSGPGR
PTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALVQPHEPGATTVPARK
FFDICRGLPEGAEIAVQLEGERMLVRSGRSRFSLSTLPAADFPNLDDWQS
EVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGEELRTVATDG
HRLAVCSMPIGQSLPSHSVIVPRKGVIELMRMLDDNPLRVQIGSNNIRAH
VGDFIFTSKLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNE
KFRGVRLYVSENQLKITANNPEQEEAEEILDVTYSGAEMEIGFNVSYVLD
VLNALKCENVRMMLTDSVSSVQIEDAASQSAAYVVMPMRL
3D structure
PDB6p81 Structure of DNA polymerase III, beta subunit/ beta sliding clamp from Klebsiella pneumoniae, expressed with an N-terminal His-Smt3 fusion tag, in complex with Griselimycin
ChainA
Resolution1.75 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A G174 H175 R176 M362 P363 G250 H251 R252 M436 P437
BS02 CA A E6 G85 E87 E84 G161 E163
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003887 DNA-directed DNA polymerase activity
GO:0008408 3'-5' exonuclease activity
Biological Process
GO:0006260 DNA replication
Cellular Component
GO:0009360 DNA polymerase III complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6p81, PDBe:6p81, PDBj:6p81
PDBsum6p81
PubMed
UniProtQ12306|SMT3_YEAST Ubiquitin-like protein SMT3 (Gene Name=SMT3)

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