Structure of PDB 6ozf Chain A

Receptor sequence
>6ozfA (length=221) Species: 2336 (Thermotoga maritima) [Search protein sequence]
MDYRQLHRWDLPPEEAIKVQNELRKKIKLTPYEGEPEYVAGVDLSFPGKE
EGLAVIVVLEYPSFKILEVVSERGEITFPYIPGLLAFREGPLFLKAWEKL
RTKPDVVVFNGQGLAHPRKLGIASHMGLFIEIPTIGVAKSRLYGTFKMPE
DKRCSWSYLYDGEEIIGCVIRTKEGSAPIFVSPGHLMDVESSKRLIKAFT
LPGRRIPEPTRLAHIYTQRLK
3D structure
PDB6ozf Evolution of Inosine-Specific Endonuclease V from Bacterial DNase to Eukaryotic RNase.
ChainA
Resolution1.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.21.7: deoxyribonuclease V.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A D43 L44 S45 F46 Y80 P82 G83 L85 E89 N110 G111 Q112 H116 G121 I122 A138 K139 S140 R141 L142 K221 D43 L44 S45 F46 Y80 P82 G83 L85 E89 N110 G111 Q112 H116 G121 I122 A138 K139 S140 R141 L142 K221
BS02 CA A D43 H214 D43 H214
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0003727 single-stranded RNA binding
GO:0004519 endonuclease activity
GO:0016891 RNA endonuclease activity, producing 5'-phosphomonoesters
GO:0043737 deoxyribonuclease V activity
GO:0046872 metal ion binding
Biological Process
GO:0006281 DNA repair
Cellular Component
GO:0005737 cytoplasm

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Cellular Component
External links
PDB RCSB:6ozf, PDBe:6ozf, PDBj:6ozf
PDBsum6ozf
PubMed31444105
UniProtQ9X2H9|NFI_THEMA Endonuclease V (Gene Name=nfi)

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