Structure of PDB 6obd Chain A

Receptor sequence

>6obdA (length=216) Species: 10090 (Mus musculus) [Search protein sequence]

DIVMTQTPLSLSVTPGQPASISCKSSQSLLYSNGKTYLNWVLQKPGQSPQ
RLIYLVSKLDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCVQGSHFH
TFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKV
QWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEV
THQGLSSPVTKSFNRG

3D structure

PDB

6obd Engineering an anti-CD52 antibody for enhanced deamidation stability.

Chain

Resolution

2.2 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	peptide	A	Y31 Y37 N39 R51 Y54 G96	Y31 Y37 N39 R51 Y54 G96
BS02	ZN	A	E84 E86	E84 E86
BS03	ZN	A	N141 N142	N141 N142

External links

PDB	RCSB:6obd, PDBe:6obd, PDBj:6obd
PDBsum	6obd
PubMed	31199181

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