Structure of PDB 6nr2 Chain A

Receptor sequence
>6nr2A (length=859) Species: 59894 (Ficedula albicollis) [Search protein sequence]
AAAAAAAAAAAAAAAAAAAAAKYIRLSCDTDSETLYDLMTQHWHLKTPNL
VISVKNFALKPRMRKIFSRLIYIAQSKGAWIFTGGTHYGLMKYIGEVVRD
NTISRSSEENVVAIRDPLYCLDNNHTHLLLVIEAKVRTQLEKYISERVIP
ESNYGGKIPIVCFAQGKETLKSINVAIKSKIPCVVVEGSGRIADVIASLV
SSCVKESLLRFLPRTISRLSEEETESWIKWIKEVLESPHLLTVIKIEEIV
SNAISFALYKAFSTNEHDRDNWNGQLKLLLEWNQLDLASDEIFTNDRNWE
SADLQDVMFTALVKDRPKFVRLFLENGLNLRKFLTTEVLRELYTNNFSSL
VFKNLQIAKNSYNDALLTFVWKMVEDFRRPITRHPLQALFIWSVLQNKKE
LSKVIWEQTRGCTLAALGASKLLKSMAKVKNDINAAGESEELANEYETRA
VELFTECYSNDEDLAEQLLTYSCEAWGGSNCLELAVEARDQQFIAQPGVQ
NFLSKQWYGEISRDTKNWKIILCLFFFPLIGCGFISFRKKKLFLYYVSFF
TSPFVVFSWNVIFYIAFLLLFAYVLLMDFQKEPTALEIILYVLVFILLCD
EVRQWYMNGSKYFSDLWNVMDTLAIFYFIAGIVFRLHSDESSWYSGRVIF
CLDYIVFTLRLIHIFTVSRNLGPKIIMLQRMMIDVFFFLFLFAVWMVAFG
VARQGILRKNEHRWEWIFRSVIYEPYLAMFGEWITIPLVCIYMLSTNILL
VNLLVAMFGYTVGNNDQVWKFQRFFLVQEYCSRLTIPFPFVIFAYIFMVM
RKEPSVCCSRNEDNEILAWEAVMKENYLVKINTKAAAAAAAAAAAAAAAA
AAAAAAAAA
3D structure
PDB6nr2 Structural basis of cooling agent and lipid sensing by the cold-activated TRPM8 channel.
ChainA
Resolution4.0 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 KXP A N692 F735 N517 F554
BS02 KXS A Y745 R841 I845 Y1004 R1007 Y564 R660 I664 Y780 R783
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sat Nov 16 17:56:26 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '6nr2', asym_id = 'A', title = 'Structural basis of cooling agent and lipid sensing by the cold-activated TRPM8 channel.'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='6nr2', asym_id='A', title='Structural basis of cooling agent and lipid sensing by the cold-activated TRPM8 channel.')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0005216,0006811,0016020,0055085', uniprot = '', pdbid = '6nr2', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0005216,0006811,0016020,0055085', uniprot='', pdbid='6nr2', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>