Structure of PDB 6ndo Chain A

Receptor sequence
>6ndoA (length=593) Species: 314565 (Xanthomonas campestris pv. campestris str. 8004) [Search protein sequence]
VCAREPIHIPGLIQPYGVLLVIDPADGRIVQASTTAADLLGVPMAALLGM
PYTQVLTLPEAQPFAVDDQPQHLMHAEVRFPQRATPPASAWVAAWHLYPQ
QWLVEMEPRDARVTLREAMPLLRSVERDPGIAEAAVRVAKGLRSLIGFDR
VMIYRFDEEWNGDIIAEARKPELEAYLGNHYPASDIPAQARALYLRNRVR
QIADVGYQPSPIQPTVHPQLGTPVDLSDVSLRSVSPVHLEYLANMGVTAT
LVASIVVNDALWGLISCHHYSPHFTNHAMRDVTDAVARTLAGRIGALQAV
ARARLESVLLTVREKLITDFNDAEHMTVELLDDMAPDLMDVVDADGVAIF
HGNDISRHGTTPDVAALRRIRDHIESEHHEALREDAVGALHVDAIGEVFP
ELADLAPLAAGFIFVPLMPQSRSALLWTRREQIQQIKWAGNFDLWQQTVR
GRARRWSPLHLESARSLRVLIELMERKRFQQDFTLLEASLSRLRDGVAII
ERGTANAAHRLLFVNTAFADVCGSDVAELIGRELQTSDAPRANVELLQDA
LRNGRAAYVTLPLQVSAPVYRQFHLEPLPSPSGVTAHWLLQLR
3D structure
PDB6ndo Pr-favoured variants of the bacteriophytochrome from the plant pathogen Xanthomonas campestris hint on light regulation of virulence-associated mechanisms.
ChainA
Resolution3.58 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 BLA A C13 M166 Y195 S198 D199 I200 P201 Y208 R214 R246 V248 S249 V251 H252 Y255 V266 H282 C2 M152 Y181 S184 D185 I186 P187 Y194 R200 R232 V234 S235 V237 H238 Y241 V252 H268
Gene Ontology
Molecular Function
GO:0009881 photoreceptor activity
Biological Process
GO:0006355 regulation of DNA-templated transcription
GO:0009584 detection of visible light

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Molecular Function
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Biological Process
External links
PDB RCSB:6ndo, PDBe:6ndo, PDBj:6ndo
PDBsum6ndo
PubMed33864705
UniProtA0A0H2XCS3|BPHY_XANC8 Bacteriophytochrome (Gene Name=bphP)

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