Structure of PDB 6mlw Chain A

Receptor sequence
>6mlwA (length=449) Species: 346 (Xanthomonas citri) [Search protein sequence]
HMTLPAFKAYDIRGRVPDELNEDLARRIGVALAAQLDQGPVVLGHDVRLA
SPALQEALSAGLRASGRDVIDIGLCGTEEVYFQTDYLKAAGGVMVTASHN
PMDYNGMKLVREQARPISSDTGLFAIRDTVAADTAAPGEPTASEQSRTDK
TAYLEHLLSYVDRSTLKPLKLVVNAGNGGAGLIVDLLAPHLPFEFVRVFH
EPDGNFPNGIPNPLLPENRDATAKAVKDNGADFGIAWDGDFDRCFFFDHT
GRFIEGYYLVGLLAQAILAKQPGGKVVHDPRLTWNTVEQVEEAGGIPVLC
KSGHAFIKEKMRSENAVYGGEMSAHHYFREFAYADSGMIPWLLIAELVSQ
SGRSLADLVEARMQKFPCSGEINFKVADAKASVARVMEHYASLSPELDYT
DGISADFGQWRFNLRSSNTEPLLRLNVETRGDAALLETRTQEISNLLRG
3D structure
PDB6mlw Inhibitory Evaluation of alpha PMM/PGM fromPseudomonas aeruginosa: Chemical Synthesis, Enzyme Kinetics, and Protein Crystallographic Study.
ChainA
Resolution1.9 Å
3D
structure
Catalytic site residues are labeled in the structure
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Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 MG A S97 D237 D239 D241 S98 D238 D240 D242
BS02 JVA A G302 H303 E320 S322 H324 R414 S416 N417 T418 R423 G303 H304 E321 S323 H325 R415 S417 N418 T419 R424 MOAD: Ki=184uM
PDBbind-CN: -logKd/Ki=3.74,Ki=184uM
Gene Ontology
--> -->
 
 
UnboundLocalError
Python 3.6.8: /usr/bin/python3
Thu Feb 20 19:36:31 2025

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '6mlw', asym_id = 'A', title = 'Inhibitory Evaluation of alpha PMM/PGM fromPseud...me Kinetics, and Protein Crystallographic Study. '
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='6mlw', asym_id='A', title='Inhibitory Evaluation of alpha PMM/PGM fromPseud...me Kinetics, and Protein Crystallographic Study. ')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0000287,0005975,0016868', uniprot = '', pdbid = '6mlw', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0000287,0005975,0016868', uniprot='', pdbid='6mlw', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>