Structure of PDB 6m9d Chain A

Receptor sequence
>6m9dA (length=368) Species: 33067 (Pseudomonas sp. 101) [Search protein sequence]
GTAKGHNPTEFPTIYDASSAPTAANTTVGIITIGGVSQTLQDLQQFTSAN
GLASVNTQTIQTGSSNGDYSDDQQGQGEWDLDSQSIVGSAGGAVQQLLFY
MADQSASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDR
IFATAAAQGQTFSVSSGDEGVYECNNRGYPDGSTYSVSWPASSPNVIAVG
GTTLYTTSAGAYSNETVWNEGLDSNGKLWATGGGYSVYESKPSWQSVVSG
TPGRRLLPDISFDAAQGTGALIYNYGQLQQIGGTSLASPIFVGLWARLQS
ANSNSLGFPAASFYSAISSTPSLVHDVKSGNNGYGGYGYNAGTGWDYPTG
WGSLDIAKLSAYIRSNGF
3D structure
PDB6m9d Inhibitor complexes of the Pseudomonas serine-carboxyl proteinase
ChainA
Resolution2.0 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) E80 D84 D170 S287
Catalytic site (residue number reindexed from 1) E78 D82 D168 S285
Enzyme Commision number 3.4.21.100: sedolisin.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A E80 L134 G135 W136 S167 G169 D170 R179 S190 S287 E78 L132 G133 W134 S165 G167 D168 R177 S188 S285
BS02 CA A D328 V329 G344 G346 D348 D326 V327 G342 G344 D346
Gene Ontology
Molecular Function
GO:0004252 serine-type endopeptidase activity
GO:0008236 serine-type peptidase activity
Biological Process
GO:0006508 proteolysis

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Molecular Function
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Biological Process
External links
PDB RCSB:6m9d, PDBe:6m9d, PDBj:6m9d
PDBsum6m9d
PubMed11747435
UniProtP42790|PICP_PSESR Pseudomonalisin (Gene Name=pcp)

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