Structure of PDB 6m7y Chain A

Receptor sequence
>6m7yA (length=952) Species: 1360 (Lactococcus lactis subsp. lactis) [Search protein sequence]
SFKAQPFLVRNTILCPNDKRSFTEYTQVIETVSKNKVFLEQLLLANPKLY
DVMQKYNAGLLKKKRVKKLFESIYKYYKRSYLRSTPFGLFSETSIGVFSK
SSQYKLMGKTTKGIRLDTQWLIRLVHKMEVDFSKKLSFTRNNANYKFGDR
VFQVYTINSSELEECNIKYTNVYQIISEFCENDYQKYEDICETVTLCYGD
EYRELSEQYLGSLIVNHYLISNLQKDLLSDFSWNTFLTKVEAIDEDKKYI
IPLKKVQKFIQEYSEIEIGEGIEKLKEIYQEMSQILENDNYIQIDLISDS
EINFDVKQKQQLEHLAEFLGNTTKSVRRTYLDDYKDKFIEKYGVDQEVQI
TELFDSTFGIGAPYNYNHPRNDFYESEPSTLYYSEEEREKYLSMYVEAVK
NHNVINLDDLESHYQKMDLEKKSELQGLELFLNLAKEYEKDIFILGDIVG
NNNLGGASGRFSALSPELTSYHRTIVDSVERENENKEITSCEIVFLPENI
RHANVMHTSIMRRKVLPFFTSTSHNEVLLTNIYIGIDEKEKFYARDISTQ
EVLKFYITSMYNKTLFSNELRFLYEISLDDKFGNLPWELIYRDFDYIPRL
VFDEIVISPAKWKIWGRDVNSKMTIRELIQSKEIPKEFYIVNGDNKVYLS
QKNPLDMEILESAIKKSSKRKDFIELQEYFEDENIINKGEKGRVADVVVP
FIRAFIREKRVSVERREKLPFNEWLYLKLYISINRQNEFLLSYLPDIQKI
VANLGGNLFFLRYTDPKPHIRLRIKCSDLFLAYGSILEILKRSRKNRIMS
TFDISIYDQEVERYGGFDTLELSEAIFCADSKIIPNLLTLIKDTNNDWKV
DDVSILVNYLYLKCFFQNDNKKILNFLNLVGDQIFYDKNFKELKHAIKNL
FLKMIAQDFELQKVYSIIDSIIHVHNNRLIGIERDKEKLIYYTLQRLFVS
EE
3D structure
PDB6m7y Characterization of glutamyl-tRNA-dependent dehydratases using nonreactive substrate mimics.
ChainA
Resolution2.794 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A R154 L166 E167 E168 C169 N170 I171 T174 N175 V176 V198 Y202 Y206 L209 S210 Y213 R150 L162 E163 E164 C165 N166 I167 T170 N171 V172 V194 Y198 Y202 L205 S206 Y209
BS02 peptide A L774 R784 R786 R826 H961 L761 R771 R773 R813 H923
Gene Ontology
Cellular Component
GO:0005886 plasma membrane

View graph for
Cellular Component
External links
PDB RCSB:6m7y, PDBe:6m7y, PDBj:6m7y
PDBsum6m7y
PubMed31409709
UniProtP20103|NISB_LACLL Nisin biosynthesis protein NisB (Gene Name=nisB)

[Back to BioLiP]