Structure of PDB 6m7d Chain A

Receptor sequence
>6m7dA (length=412) Species: 302272 (Sendai virus (strain Ohita)) [Search protein sequence]
GLLSTFDTFSSRRSESINKSGGGAVIPGQRSTVSVFVLGPSVTDDADKLS
IATTFLAHSLDTDKQHSQRGGFLVSLLAMAYSSPELYLTTNGVNADVKYV
IYNIEKDPKRTKTDGFIVKTRDMEYERTTEWLFGPMVNKSPLFQGQRDAA
DPDTLLQIYGYPACLGAIIVQVWIVLVKAITSSAGLRKGFFNRLEAFRQD
GTVKGALVFTGETVEGIGSVMRSQQSLVSLMVETLVTMNTARSDLTTLEK
NIQIVGNYIRDAGLASFMNTIKYGVETKMAALTLSNLRPDINKLRSLIDT
YLSKGPRAPFICILKDPVHGEFAPGNYPALWSYAMGVAVVQNKAMQQYVT
GRTYLDMEMFLLGQAVAKDAESKISSALEDELGVTDTAKERLRHHLANLS
GGDGAYHKPTGG
3D structure
PDB6m7d structure of the nucleocapsid of sendai virus at 2.9 Angstroms resolution
ChainA
Resolution2.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna A K180 T183 S184 N194 R195 Y260 G265 A267 N271 A325 P326 A346 M347 Y350 V351 R354 K178 T181 S182 N192 R193 Y258 G263 A265 N269 A323 P324 A344 M345 Y348 V349 R352
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0005198 structural molecule activity
Cellular Component
GO:0019013 viral nucleocapsid
GO:0019029 helical viral capsid
GO:0030430 host cell cytoplasm
GO:1990904 ribonucleoprotein complex

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Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:6m7d, PDBe:6m7d, PDBj:6m7d
PDBsum6m7d
PubMed
UniProtO57286|NCAP_SENDO Nucleoprotein (Gene Name=N)

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