Structure of PDB 6ll8 Chain A

Receptor sequence
>6ll8A (length=306) Species: 912551 (Shewanella sp. AS-11) [Search protein sequence]
SMYVVGHKIPDSDSICGAIALAYLKNQIGEPAIAARLGELSPETAFILEK
FGFEAPEYKTSYAGEEVYIVDHSEITQAPDDIAQATIVGIVDHHKLGDLT
TSTPLECWIRPVGCSNTVIKMMYDFYQVKIPANIAGIMMCAILSDTVIFK
SPTCTTADIRCVEALAEIAGVEDFKEVGMDMFKVKSAVEGTPARDLVMRD
FKDFNMNGNLVGIGQLEVIDLAVFDDIKADLEADIAKLKVEGNRHSVLLL
LTDIMKEGSEMLVVSDSADLTERAYGKPTVDGRVWLDGVLSRKKQVVPAL
QDAFQK
3D structure
PDB6ll8 X-ray Crystallography and Electron Paramagnetic Resonance Spectroscopy Reveal Active Site Rearrangement of Cold-Adapted Inorganic Pyrophosphatase.
ChainA
Resolution1.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.6.1.1: inorganic diphosphatase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 MG A H8 D12 D72 H7 D11 D71
BS02 MG A D14 D72 H94 D146 D13 D71 H93 D145
BS03 MG A D12 D146 D11 D145
BS04 MG A P43 E44 K186 P42 E43 K185
BS05 CA A G98 D99 L100 G97 D98 L99
BS06 2PN A D12 D72 H94 H95 K203 R293 K294 D11 D71 H93 H94 K202 R292 K293
Gene Ontology
Molecular Function
GO:0004427 inorganic diphosphate phosphatase activity
GO:0016462 pyrophosphatase activity
GO:0016787 hydrolase activity
GO:0046872 metal ion binding
Cellular Component
GO:0005737 cytoplasm

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:6ll8, PDBe:6ll8, PDBj:6ll8
PDBsum6ll8
PubMed32152422
UniProtL8AXY8

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