Structure of PDB 6lf8 Chain A

Receptor sequence

>6lf8A (length=275) Species: 9823 (Sus scrofa) [Search protein sequence]

GPHSLSYFYTAVSRPDRGDSRFIAVGYVDDTQFVRFDNYAPNPRMEPRVP
WIQQEGQEYWDRETRNVKETAQTYGVGLNTLRGYYNQSEAGSHTLQSMYG
CYLGPDGLLLHGYRQDAYDGADYIALNEDLRSWTAADMAAQITKRKWEAA
DEAERRRSYLQGLCVESLRRYLEMGKDTLQRAEPPKTHVTRHPSSDLGVT
LRCWALGFYPKEISLTWQREGQDQSQDMELVETRPSGDGTFQKWAALVVP
PGEEQSYTCHVQHEGLQEPLTLRWD

3D structure

PDB

6lf8 Structure and Peptidomes of Swine MHC Class I with Long Peptides Reveal the Cross-Species Characteristics of the Novel N-Terminal Extension Presentation Mode.

Chain

Resolution

2.5 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	A	L5 Y7 M45 Y59 E63 V67 E69 T70 T73 Y74 V76 G77 T80 L81 Y84 Y99 D116 T143 K146 W147 E152 R155 R156 Y159 L163 E166 S167 R170 Y171	L5 Y7 M45 Y59 E63 V67 E69 T70 T73 Y74 V76 G77 T80 L81 Y84 Y99 D116 T143 K146 W147 E152 R155 R156 Y159 L163 E166 S167 R170 Y171

External links

PDB	RCSB:6lf8, PDBe:6lf8, PDBj:6lf8
PDBsum	6lf8
PubMed	34937745
UniProt	O19244

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