Structure of PDB 6l5a Chain A

Receptor sequence
>6l5aA (length=208) Species: 246196 (Mycolicibacterium smegmatis MC2 155) [Search protein sequence]
MAGAQDFVPHTADLAELAAAAGECRGCGLYRDATQAVFGAGGRSARIMMI
GEQPGDKEDLAGLPFVGPAGRLLDRALEAADIDRDALYVTNAVKHFKFTR
AAGGKRRIEKTPSRTEVVACRPWLIAEMTSVEPDVVVLLGATAAKALLGN
DFRVTQHRGEVLHVDDVPGDPALVATVHPSSLLRGPKEERESAFAGLVDD
LRVAADVR
3D structure
PDB6l5a Structural insights into an MsmUdgX mutant capable of both crosslinking and uracil excision capability.
ChainA
Resolution1.80007 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 SF4 A C24 G26 C27 H95 C120 W123 C24 G26 C27 H95 C120 W123
Gene Ontology
Molecular Function
GO:0004844 uracil DNA N-glycosylase activity
GO:0046872 metal ion binding
GO:0051539 4 iron, 4 sulfur cluster binding
GO:0097506 deaminated base DNA N-glycosylase activity
Biological Process
GO:0006281 DNA repair

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:6l5a, PDBe:6l5a, PDBj:6l5a
PDBsum6l5a
PubMed33248387
UniProtA0QP43

[Back to BioLiP]