Structure of PDB 6l35 Chain A

Receptor sequence
>6l35A (length=742) Species: 3218 (Physcomitrium patens) [Search protein sequence]
EVKIMVEKDPVKTSFEKWAKPGHFSRTLAKGPNTTTWIWNLHADAHDFDS
HTNDLEEISRKVFSAHFGQLAVIFIWLSGMYFHGARFSNYEAWLSDPTHI
KPSAQVVWPIVGQKILNGDVGGGFQGIQITSGFFQLWRASGITSELQLYT
TAIGGLIFAALMLFAGWFHYHKAAPKLAWFQNVESMLNHHLAGLLGLGSL
AWAGHQVHVSLPINRLLDAGVDPKEIPLPHEFILNRDLLAQLYPSFSKGL
TPFFTLNWSEYSDFLTFRGGLNPVTGGLWLTDTAHHHLAIAVLFLVAGHM
YRTNFGIGHSMKEILEAHKGPFTGEGHKGLYEILTTSWHAQLAINLAMLG
SLTIIVAHHMYAMPPYPYLATDYATQLSLFTHHMWIGGFLVVGAAAHAAI
FMVRDYDPTTQYNNLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDT
MSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSLTAPNATASTSLTWG
GGDLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSS
RLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNAISVVIFHF
SWKMQSDVWGSISDQGVVTHITGGNFAQSSITINGWLRDFLWAQASQVIQ
SYGSSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKV
APAIQPRALSIVQGRAVGVAHYLLGGIATTWAFFLARIISVG
3D structure
PDB6l35 Antenna arrangement and energy-transfer pathways of PSI-LHCI from the moss Physcomitrella patens.
ChainA
Resolution3.23 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 1.97.1.12: photosystem I.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CLA A F450 I536 Y598 F606 A653 F671 H675 W678 Y730 T737 T738 F741 F442 I528 Y590 F598 A645 F663 H667 W670 Y722 T729 T730 F733
BS02 CLA A F676 A679 F680 L682 M683 Y691 W692 F668 A671 F672 L674 M675 Y683 W684
BS03 CLA A F450 W596 N599 Y730 F442 W588 N591 Y722
BS04 CLA A P29 I46 H50 P21 I38 H42
BS05 CLA A H31 F32 A53 H54 F56 H23 F24 A45 H46 F48
BS06 CLA A H54 V70 A73 H74 Q77 L78 I81 F82 F166 W346 H347 L350 N353 H46 V62 A65 H66 Q69 L70 I73 F74 F158 W338 H339 L342 N345
BS07 CLA A Q77 I81 W84 Q69 I73 W76
BS08 CLA A G87 F90 H91 F95 W116 G79 F82 H83 F87 W108
BS09 CLA A M88 A112 Q113 I137 T138 S139 A666 Y667 M80 A104 Q105 I129 T130 S131 A658 Y659
BS10 CLA A W116 Q121 W108 Q113
BS11 CLA A I12 F75 A173 F176 H177 W187 I4 F67 A165 F168 H169 W179
BS12 CLA A T21 S22 K25 W26 H31 K69 S72 G174 W175 Y178 H179 T13 S14 K17 W18 H23 K61 S64 G166 W167 Y170 H171
BS13 CLA A V10 I12 W187 H197 V2 I4 W179 H189
BS14 CLA A F71 H74 F75 W187 M194 H197 H198 F63 H66 F67 W179 M186 H189 H190
BS15 CLA A G149 I150 Q155 T159 A209 H213 H216 P237 G141 I142 Q147 T151 A201 H205 H208 P229
BS16 CLA A G212 V215 H216 R244 L258 L296 G204 V207 H208 R236 L250 L288
BS17 CLA A W266 S267 Y269 L273 H293 L296 A297 N498 W258 S259 Y261 L265 H285 L288 A289 N490
BS18 CLA A F275 H294 I298 H367 M371 F267 H286 I290 H359 M363
BS19 CLA A W210 H294 H295 P373 Y374 W202 H286 H287 P365 Y366
BS20 CLA A H197 A200 H307 T311 F313 H189 A192 H299 T303 F305
BS21 CLA A L199 A305 M308 Y309 I322 L191 A297 M300 Y301 I314
BS22 CLA A H307 M308 I315 G316 H317 H299 M300 I307 G308 H309
BS23 CLA A H317 E321 H326 H309 E313 H318
BS24 CLA A H335 L423 H327 L415
BS25 CLA A V191 M194 L195 H198 L342 T343 W346 Q349 I352 N353 M356 L357 V183 M186 L187 H190 L334 T335 W338 Q341 I344 N345 M348 L349
BS26 CLA A I362 I363 H366 V399 T544 I354 I355 H358 V391 T536
BS27 CLA A H366 H367 M371 W507 H358 H359 M363 W499
BS28 CLA A W84 S139 T389 H390 W393 I735 W739 W76 S131 T381 H382 W385 I727 W731
BS29 CLA A F141 T361 Y374 L387 H390 H391 F133 T353 Y366 L379 H382 H383
BS30 CLA A H50 A51 H54 D55 L350 L354 F397 G401 H405 I408 W587 H42 A43 H46 D47 L342 L346 F389 G393 H397 I400 W579
BS31 CLA A T331 R426 H430 H437 T323 R418 H422 H429
BS32 CLA A H437 W440 H429 W432
BS33 CLA A W440 H448 W432 H440
BS34 CLA A G451 L452 I454 H455 M459 R464 D467 G443 L444 I446 H447 M451 R456 D459
BS35 CLA A I484 H488 A491 T495 I476 H480 A483 T487
BS36 CLA A F275 T495 P497 N498 F267 T487 P489 N490
BS37 CLA A H366 Q485 W507 H534 H537 V604 H607 H358 Q477 W499 H526 H529 V596 H599
BS38 CLA A L445 P478 V479 F480 A481 F531 H534 H535 L437 P470 V471 F472 A473 F523 H526 H527
BS39 CLA A L438 I541 H542 L430 I533 H534
BS40 CLA A I699 A702 H703 I691 A694 H695
BS41 CLA A F680 V725 H729 F672 V717 H721
BS42 PQN A F684 R689 W692 A716 L717 F676 R681 W684 A708 L709
BS43 CLA A K327 P329 F330 K319 P321 F322
BS44 SF4 A C573 P576 C582 C565 P568 C574
BS45 CLA A L672 F676 A679 L664 F668 A671
BS46 CLA A F539 I547 F595 W596 F531 I539 F587 W588
BS47 CLA A T43 W47 H703 P710 P714 T35 W39 H695 P702 P706
BS48 CLA A F261 F262 F253 F254
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0009055 electron transfer activity
GO:0016168 chlorophyll binding
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding
GO:0051539 4 iron, 4 sulfur cluster binding
Biological Process
GO:0015979 photosynthesis
Cellular Component
GO:0009507 chloroplast
GO:0009522 photosystem I
GO:0009535 chloroplast thylakoid membrane
GO:0009579 thylakoid
GO:0016020 membrane

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6l35, PDBe:6l35, PDBj:6l35
PDBsum6l35
PubMed33589616
UniProtQ8MFA3|PSAA_PHYPA Photosystem I P700 chlorophyll a apoprotein A1 (Gene Name=psaA)

[Back to BioLiP]