Structure of PDB 6kqx Chain A

Receptor sequence
>6kqxA (length=327) Species: 224308 (Bacillus subtilis subsp. subtilis str. 168) [Search protein sequence]
HISMINIPAYGHVNPTLALVEKLCEKGHRVTYATTEEFAPAVQQAGGEAL
IYHTSLNESLSILPQLEELYKDDQPDLIIYDFVALAGKLFAEKLNVPVIK
LCSSYAQNESFQLGNEDMLKQLAVPEALNIVFMPKSFQIQHETFDDRFCF
VGPSLGIDKDDRPLMLISLGTAFNAWPEFYKMCIKAFRDSSWQVIMSVGK
TIDPESLEDIPANFTIRQSVPQLEVLEKADLFISHGGMNSTMEAMNAGVP
LVVIPQMYEQELTANRVDELGLGVYLPKEEVTVSSLQEAVQAVSSDQELL
SRVKNMQKDVKEAGGAERAAAEIEAFM
3D structure
PDB6kqx Structural dissection of unnatural ginsenoside-biosynthetic UDP-glycosyltransferase Bs-YjiC from Bacillus subtilis for substrate promiscuity.
ChainA
Resolution2.44 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.4.1.384: NDP-glycosyltransferase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 UDP A N18 G228 T229 S255 S277 V278 Q280 H293 G295 N297 S298 E301 N14 G170 T171 S197 S219 V220 Q222 H235 G237 N239 S240 E243
Gene Ontology
Molecular Function
GO:0008194 UDP-glycosyltransferase activity
GO:0016757 glycosyltransferase activity
GO:0016758 hexosyltransferase activity
Biological Process
GO:0017000 antibiotic biosynthetic process

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Molecular Function
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Biological Process
External links
PDB RCSB:6kqx, PDBe:6kqx, PDBj:6kqx
PDBsum6kqx
PubMed33310191
UniProtO34539|NDPGT_BACSU NDP-glycosyltransferase YjiC (Gene Name=yjiC)

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