Structure of PDB 6knk Chain A

Receptor sequence
>6knkA (length=383) Species: 158878 (Staphylococcus aureus subsp. aureus Mu50) [Search protein sequence]
MRIVQPVIEQLKAQSHPVCHYIYDLVGLEHHLQHITSSLPSNCQMYYAMA
ANSERTILDTISQYVEGFEVASQGEIAKGLAFKPANHIIFGGPGKTDEEL
RYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRVNLARPTQFGIS
EDEVDDVIEAALVMPNIHLDGFHFHSISNNLDSNLHVDVVKLYFKKAKSW
SEKHRFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQEMEDVT
LNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHN
HPFEIYRYKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTG
DVIVFKYAGAYGWSISHHDFLSHPHPEFIYLTQ
3D structure
PDB6knk Structural Insights into Substrate Recognition and Activity Regulation of the Key Decarboxylase SbnH in Staphyloferrin B Biosynthesis.
ChainA
Resolution2.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 DN9 A H187 E266 G268 R269 R304 S308 W309 Y373 H175 E254 G256 R257 R292 S296 W297 Y361
BS02 X3J A T345 K347 T333 K335
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0008836 diaminopimelate decarboxylase activity
GO:0016830 carbon-carbon lyase activity
Biological Process
GO:0006596 polyamine biosynthetic process
GO:0009089 lysine biosynthetic process via diaminopimelate

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Molecular Function
View graph for
Biological Process
External links
PDB RCSB:6knk, PDBe:6knk, PDBj:6knk
PDBsum6knk
PubMed31634470
UniProtA0A0H3JPF2

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