Structure of PDB 6kk4 Chain A

Receptor sequence
>6kk4A (length=39) Species: 64320 (Zika virus) [Search protein sequence]
VDMYIERAGDITWEKDAEVTGNSPRLDVALDESGDFSLV
3D structure
PDB6kk4 Structure-Based Macrocyclization of Substrate Analogue NS2B-NS3 Protease Inhibitors of Zika, West Nile and Dengue viruses.
ChainA
Resolution1.74 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.1.1.56: mRNA (guanine-N(7))-methyltransferase.
2.1.1.57: methyltransferase cap1.
2.7.7.48: RNA-directed RNA polymerase.
3.4.21.91: flavivirin.
3.6.1.15: nucleoside-triphosphate phosphatase.
3.6.4.13: RNA helicase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 DE0 A D83 F84 D35 F36
Gene Ontology
Molecular Function
GO:0004252 serine-type endopeptidase activity
Cellular Component
GO:0044423 virion component

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:6kk4, PDBe:6kk4, PDBj:6kk4
PDBsum6kk4
PubMed32501637
UniProtQ32ZE1|POLG_ZIKV Genome polyprotein

[Back to BioLiP]