Structure of PDB 6k61 Chain A
Receptor sequence
>6k61A (length=742) Species:
103690
(Nostoc sp. PCC 7120 = FACHB-418) [
Search protein sequence
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KKARVIVDKDPVPTSFEKWAQPGHFDRTLARGPKTTTWIWNLHALAHDFD
THTSDLEDISRKIFAAHFGHLAVVTIWLSGMIFHGAKFSNYEAWLSDPLN
VRPSAQVVWPIVGQDILNGDVGGGFHGIQITSGLFQVWRGWGITNSFQLY
CTAIGGLVLAGLFLFAGWFHYHKRAPKLEWFQNVESMLNHHLQVLLGCGS
LGWAGHLIHVSAPINKLMDAGVAVKDIPLPHEFILNKSLLIDLFPGFAAG
LTPFFTLNWGQYADFLTFKGGLNPVTGGLWMTDIAHHHLAIAVVFIIAGH
QYRTNWGIGHSIKEILENHKGPFTGEGHKGLYENLTTSWHAQLATNLAFL
GSLTIIIAHHMYAMPPYPYLATDYATQLCIFTHHIWIGGFLIVGGAAHAA
IFMVRDYDPVVNQNNVLDRVIRHRDAIISHLNWVCIFLGFHSFGLYIHND
TMRALGRPQDMFSDTAIQLQPVFAQWVQNLHTLAPGGTAPNALEPVSYAF
GGGVLAVGGKVAMMPIALGTADFLIHHIHAFTIHVTVLILLKGVLFARSS
RLIPDKANLGFRFPCDGPGRGGTCQVSGWDHVFLGLFWMYNSLSIVIFHF
SWKMQSDVWGTVDAAGNVSHITGGNFAQSAITINGWLRDFLWAQASQVIN
SYGSALSAYGLMFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKV
APAIQPRALSITQGRAVGVAHYLLGGIATTWAFFHAHILSVG
3D structure
PDB
6k61
Structural and functional insights into the tetrameric photosystem I from heterocyst-forming cyanobacteria.
Chain
A
Resolution
2.37 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
1.97.1.12
: photosystem I.
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
CL0
A
I538 F541 Y600 N601 S604 I605 F608 L651 F673 H677 W680 T739 T740 F743
I528 F531 Y590 N591 S594 I595 F598 L641 F663 H667 W670 T729 T730 F733
BS02
CLA
A
F453 I457 F541 F597 W598 N601 I643 W680 Y732
F443 I447 F531 F587 W588 N591 I633 W670 Y722
BS03
CLA
A
P32 I49 L52 H53
P22 I39 L42 H43
BS04
CLA
A
H34 F35 A56 H57
H24 F25 A46 H47
BS05
CLA
A
H57 I73 A76 H77 H80 L81 V84 W349 H350 Q352 L353 N356
H47 I63 A66 H67 H70 L71 V74 W339 H340 Q342 L343 N346
BS06
CLA
A
H80 V84 W87 F400 L401
H70 V74 W77 F390 L391
BS07
CLA
A
G90 F93 H94 F98 W119
G80 F83 H84 F88 W109
BS08
CLA
A
M91 Q116 I140 S142 A668 Y669
M81 Q106 I130 S132 A658 Y659
BS09
CLA
A
Q116 W119 Q124 L127 A668
Q106 W109 Q114 L117 A658
BS10
CLA
A
F74 F78 A176 F179 H180 W190
F64 F68 A166 F169 H170 W180
BS11
CLA
A
T24 S25 F26 K28 W29 H34 K72 A75 L174 G177 W178 Y181 H182
T14 S15 F16 K18 W19 H24 K62 A65 L164 G167 W168 Y171 H172
BS12
CLA
A
W190 S196 H200 N315
W180 S186 H190 N305
BS13
CLA
A
F74 H77 F78 L81 W190 F191 M197 H200 H201 V204
F64 H67 F68 L71 W180 F181 M187 H190 H191 V194
BS14
CLA
A
W151 G152 I153 Q158 T162 G212 W213 H216 V220 P240
W141 G142 I143 Q148 T152 G202 W203 H206 V210 P230
BS15
CLA
A
L211 G215 I218 H219 K247 F257 G260 L261 Y272
L201 G205 I208 H209 K237 F247 G250 L251 Y262
BS16
CLA
A
F157 H241 L245
F147 H231 L235
BS17
CLA
A
W269 L276 H296 L299 A300 V303 N501
W259 L266 H286 L289 A290 V293 N491
BS18
CLA
A
F278 L289 D293 I294 H296 H297 I301 H370 M374 V506
F268 L279 D283 I284 H286 H287 I291 H360 M364 V496
BS19
CLA
A
W151 L206 S210 W213 H297 H298 F305 I367 P376 Y377
W141 L196 S200 W203 H287 H288 F295 I357 P366 Y367
BS20
CLA
A
H200 Q203 C208 H310 T314
H190 Q193 C198 H300 T304
BS21
CLA
A
L202 L206 V304 F305 A308 Q311 Y312
L192 L196 V294 F295 A298 Q301 Y302
BS22
CLA
A
I307 Q311 I318 G319 H320
I297 Q301 I308 G309 H310
BS23
CLA
A
H320 N328 H329
H310 N318 H319
BS24
CLA
A
L326 H329 H338 V426 L427
L316 H319 H328 V416 L417
BS25
CLA
A
V194 M197 L198 H201 I322 L345 T346 S348 W349 Q352 N356 F359
V184 M187 L188 H191 I312 L335 T336 S338 W339 Q342 N346 F349
BS26
CLA
A
I365 I366 H369 I402 I543 V547
I355 I356 H359 I392 I533 V537
BS27
CLA
A
F359 I366 H370 A373 M374 V506 F510
F349 I356 H360 A363 M364 V496 F500
BS28
CLA
A
W87 M91 S142 C389 T392 H393 W396 I737 W741
W77 M81 S132 C379 T382 H383 W386 I727 W731
BS29
CLA
A
W87 S142 G143 T364 I367 M371 Y377 H393 H394
W77 S132 G133 T354 I357 M361 Y367 H383 H384
BS30
CLA
A
H53 H57 D58 L353 L357 F400 G404 H408 I411 R415 R572 W589
H43 H47 D48 L343 L347 F390 G394 H398 I401 R405 R562 W579
BS31
CLA
A
F333 T334 V426 R429 V430 H433 I437 H440
F323 T324 V416 R419 V420 H423 I427 H430
BS32
CLA
A
H440 W443
H430 W433
BS33
CLA
A
W443 I446 F447 F450 H451
W433 I436 F437 F440 H441
BS34
CLA
A
F450 G454 L455 I457 H458 T461 M462 R467 D470
F440 G444 L445 I447 H448 T451 M452 R457 D460
BS35
CLA
A
L490 H491 A494 T498
L480 H481 A484 T488
BS36
CLA
A
F278 T498 P500 N501
F268 T488 P490 N491
BS37
CLA
A
H369 Y372 A484 V487 Q488 F510 I526 H536 H539 V606 H609
H359 Y362 A474 V477 Q478 F500 I516 H526 H529 V596 H599
BS38
CLA
A
F447 L448 P481 F483 A484 F533 H536 H537 H544
F437 L438 P471 F473 A474 F523 H526 H527 H534
BS39
CLA
A
L441 V444 H544 V547
L431 V434 H534 V537
BS40
CLA
A
T46 I49 H705 P712 P716
T36 I39 H695 P702 P706
BS41
CLA
A
W50 F682 A726 V727 H731
W40 F672 A716 V717 H721
BS42
CLA
A
W443 I446
W433 I436
BS43
CLA
A
K330 G331 P332 F333
K320 G321 P322 F323
BS44
PQN
A
M685 F686 S689 R691 W694 A718 L719
M675 F676 S679 R681 W684 A708 L709
BS45
SF4
A
C575 G577 P578 C584
C565 G567 P568 C574
BS46
CLA
A
F678 A681 F682 L684 M685 Y693 W694
F668 A671 F672 L674 M675 Y683 W684
BS47
CLA
A
I701 A704 H705
I691 A694 H695
BS48
CLA
A
L671 L674 G675 H677 F678 W680 A681
L661 L664 G665 H667 F668 W670 A671
BS49
CLA
A
L647 W652
L637 W642
BS50
CLA
A
N442 C445 I446 G449 F450 L548 I549 F597 W598
N432 C435 I436 G439 F440 L538 I539 F587 W588
Gene Ontology
Molecular Function
GO:0000287
magnesium ion binding
GO:0009055
electron transfer activity
GO:0016168
chlorophyll binding
GO:0016491
oxidoreductase activity
GO:0046872
metal ion binding
GO:0051539
4 iron, 4 sulfur cluster binding
Biological Process
GO:0015979
photosynthesis
Cellular Component
GO:0009522
photosystem I
GO:0009579
thylakoid
GO:0016020
membrane
GO:0031676
plasma membrane-derived thylakoid membrane
GO:0042651
thylakoid membrane
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:6k61
,
PDBe:6k61
,
PDBj:6k61
PDBsum
6k61
PubMed
31595062
UniProt
P58576
|PSAA_NOSS1 Photosystem I P700 chlorophyll a apoprotein A1 (Gene Name=psaA)
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